RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 SMTNL2Q2TAL5 461 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 MTHFD1LQ6UB35 978 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 POLNQ7Z5Q5 900 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 UNC45BQ8IWX7 931 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 FBXO27Q8NI29 283 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 SLC44A1Q8WWI5 657 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 RSAD2Q8WXG1 361 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 PPP1R12CQ9BZL4 782 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 PRDM16Q9HAZ2 1276 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 PXMP2Q9NR77 195 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 ETAA1Q9NY74 926 aa10.66□□□□□ -0.7
CCDC36-201ENST00000296449 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.66□□□□□ -0.7
CCDC36-201ENST00000296449 SRCAPQ6ZRS2 3230 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 TCRBV9S1A1TA0A576 114 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 KLF11O14901 512 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 MAGEC1O60732 1142 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 LSM8O95777 96 aaKnown RBP10.65□□□□□ -0.7
CCDC36-201ENST00000296449 IL1R2P27930 398 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 ELK3P41970 407 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 SLC25A11Q02978 314 aaKnown RBP10.65□□□□□ -0.7
CCDC36-201ENST00000296449 NCOA4Q13772 614 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 KBTBD12Q3ZCT8 623 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 HSF5Q4G112 596 aaPredicted RBP10.65□□□□□ -0.7
CCDC36-201ENST00000296449 WDR81Q562E7 1941 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 KCNT1Q5JUK3 1230 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 CYP4A22Q5TCH4 519 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 RFX8Q6ZV50 586 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 BBS12Q6ZW61 710 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 WDTC1Q8N5D0 677 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 ARFGAP1Q8N6T3 406 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 ATP6V0A1Q93050 837 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 CGRRF1Q99675 332 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 ZWILCHQ9H900 591 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 MAP3K20Q9NYL2 800 aaKnown RBP10.65□□□□□ -0.7
CCDC36-201ENST00000296449 ZNF70Q9UC06 446 aaPredicted RBP10.65□□□□□ -0.7
CCDC36-201ENST00000296449 ARID2Q68CP9 1835 aa10.65□□□□□ -0.7
CCDC36-201ENST00000296449 CNTNAP2Q9UHC6 1331 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 CAPN14A8MX76 684 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 B2RBV5 119 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 H0YCG3 227 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 TAP1Q03518 808 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 NBPF20Q3BBV1 942 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 SWSAP1Q6NVH7 229 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 TREML1Q86YW5 311 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 NLGN1Q8N2Q7 840 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 FAM71DQ8N9W8 422 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 TTC13Q8NBP0 860 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 TMEM35BQ8NCS4 154 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 FAM161BQ96MY7 647 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 NR1H4Q96RI1 486 aaPredicted RBP10.65□□□□□ -0.71
CCDC36-201ENST00000296449 ZNF341Q9BYN7 854 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 FAM192AQ9GZU8 254 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 CYP26B1Q9NR63 512 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 DDX43Q9NXZ2 648 aaKnown RBP10.65□□□□□ -0.71
CCDC36-201ENST00000296449 PDP2Q9P2J9 529 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 SEPT9Q9UHD8 586 aaPredicted RBP10.65□□□□□ -0.71
CCDC36-201ENST00000296449 IKBKGQ9Y6K9 419 aa10.65□□□□□ -0.71
CCDC36-201ENST00000296449 YDJCA8MPS7 323 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 H3BRJ5 948 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 FAM155BO75949 473 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 INHBAP08476 426 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 CD48P09326 243 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 RFC1P35251 1148 aaPredicted RBP10.64□□□□□ -0.71
CCDC36-201ENST00000296449 NRLP54845 237 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 BASP1P80723 227 aaKnown RBP10.64□□□□□ -0.71
CCDC36-201ENST00000296449 ZNF200P98182 395 aaPredicted RBP10.64□□□□□ -0.71
CCDC36-201ENST00000296449 GPAT2Q6NUI2 795 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 CDHR3Q6ZTQ4 885 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 TMPRSS6Q8IU80 811 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 CCNJLQ8IV13 435 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 RBM15BQ8NDT2 890 aaKnown RBP10.64□□□□□ -0.71
CCDC36-201ENST00000296449 CCDC110Q8TBZ0 833 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 KCNN1Q92952 543 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 CCDC28BQ9BUN5 200 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 TMEM39BQ9GZU3 492 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 SLC38A10Q9HBR0 1119 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 KBTBD13C9JR72 458 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 LRCH4O75427 683 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 CST3P01034 146 aaPredicted RBP10.64□□□□□ -0.71
CCDC36-201ENST00000296449 ENO1P06733 434 aaKnown RBP10.64□□□□□ -0.71
CCDC36-201ENST00000296449 KDELR1P24390 212 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 PSMA2P25787 234 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 PRKCEQ02156 737 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 TAZQ16635 292 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 ZNF394Q53GI3 561 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 ARHGEF16Q5VV41 709 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 SESTD1Q86VW0 696 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 CCDC60Q8IWA6 550 aaPredicted RBP10.64□□□□□ -0.71
CCDC36-201ENST00000296449 FGD4Q96M96 766 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 SRPK1Q96SB4 655 aaKnown RBP10.64□□□□□ -0.71
CCDC36-201ENST00000296449 MSTO1Q9BUK6 570 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 KCNK4Q9NYG8 393 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 DNAJB4Q9UDY4 337 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 ANGPTL2Q9UKU9 493 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 TEX264Q9Y6I9 313 aa10.64□□□□□ -0.71
CCDC36-201ENST00000296449 RTN3O95197 1032 aaPredicted RBP10.63□□□□□ -0.71
CCDC36-201ENST00000296449 POLE2P56282 527 aa10.63□□□□□ -0.71
CCDC36-201ENST00000296449 SP4Q02446 784 aa10.63□□□□□ -0.71
CCDC36-201ENST00000296449 DGKZQ13574 1117 aa10.63□□□□□ -0.71
CCDC36-201ENST00000296449 DPYSL3Q14195 570 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms