RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 MTMR11A4FU01 709 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 FSCN2O14926 492 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 TEX28O15482 410 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 RTN2O75298 545 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 BEST1O76090 585 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 FTLP02792 175 aaPredicted RBP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 CNPP09543 421 aaKnown RBP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 NPR3P17342 541 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 CYP2F1P24903 491 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 CREMQ03060 361 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 BST2Q10589 180 aaKnown RBP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 SMARCB1Q12824 385 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 SMC1AQ14683 1233 aaKnown RBP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 PLPP4Q5VZY2 271 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 MRPL43Q8N983 215 aaKnown RBP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 ATAD1Q8NBU5 361 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 SMARCD1Q96GM5 515 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 ZMYND15Q9H091 742 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 TMEM30AQ9NV96 361 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 PCDHB5Q9Y5E4 795 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 PCDHA13Q9Y5I0 950 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 IRAK3Q9Y616 596 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 ATP8B3O60423 1300 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 C2orf71A6NGG8 1288 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 HIDE1A8MVS5 230 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 SETSIPP0DME0 302 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 IRS1P35568 1242 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 MAGEA1P43355 309 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 NSFP46459 744 aaKnown RBP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 NDUFV1P49821 464 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 MAP3K7CLP57077 242 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 KRT83P78385 493 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 RAB33AQ14088 237 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 CFAP221Q4G0U5 840 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 SYT10Q6XYQ8 523 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 CLEC20AQ6ZU45 233 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 MICAL1Q8TDZ2 1067 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 MRPL38Q96DV4 380 aaKnown RBP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 FUBP3Q96I24 572 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 GAS2L1Q99501 681 aaPredicted RBP18.78■□□□□ 0.6
CCDC78-201ENST00000293889 SMOQ99835 787 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 PACSIN1Q9BY11 444 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 MTCH2Q9Y6C9 303 aa18.78■□□□□ 0.6
CCDC78-201ENST00000293889 ABLIM3O94929 683 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 POU3F3P20264 500 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-201ENST00000293889 IGFBP4P22692 258 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 ADCY1Q08828 1119 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 PDCLQ13371 301 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 NAA30Q147X3 362 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-201ENST00000293889 C10orf76Q5T2E6 689 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 PMF1Q6P1K2 205 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 PHF13Q86YI8 300 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-201ENST00000293889 TTC9BQ8N6N2 239 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 ZMIZ2Q8NF64 920 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 ZNF461Q8TAF7 563 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 C2orf15Q8WU43 125 aaKnown RBP18.77■□□□□ 0.6
CCDC78-201ENST00000293889 KCNK16Q96T55 309 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 LMAN2LQ9H0V9 348 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 CRISPLD1Q9H336 500 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 CSNK1G1Q9HCP0 422 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 ABCB6Q9NP58 842 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 NGRNQ9NPE2 291 aaKnown RBP18.77■□□□□ 0.6
CCDC78-201ENST00000293889 TFR2Q9UP52 801 aa18.77■□□□□ 0.6
CCDC78-201ENST00000293889 PTPRDP23468 1912 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 XPO1O14980 1071 aaKnown RBP18.76■□□□□ 0.59
CCDC78-201ENST00000293889 CCDC175P0C221 793 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 MMP8P22894 467 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 RGS7P49802 495 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 GALCP54803 685 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 SLC8A3P57103 927 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 PTP4A2Q12974 167 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 PTPN20Q4JDL3 420 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 C2CD6Q53TS8 623 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 TPGS2Q68CL5 300 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 MMS22LQ6ZRQ5 1243 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 MON1BQ7L1V2 547 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 ERICH1Q86X53 443 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 SPPL2BQ8TCT7 592 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 KLHL5Q96PQ7 755 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 CPXM1Q96SM3 734 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 AFF4Q9UHB7 1163 aaKnown RBP18.76■□□□□ 0.59
CCDC78-201ENST00000293889 SLC27A5Q9Y2P5 690 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 PPP2R2CQ9Y2T4 447 aa18.76■□□□□ 0.59
CCDC78-201ENST00000293889 A0A0U1RQJ8 604 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 RCCD1A6NED2 376 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 H2AFZP0C0S5 128 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 H2AFXP16104 143 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-201ENST00000293889 MAGEA11P43364 429 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 PLA2G4AP47712 749 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 DUSP4Q13115 394 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 PPP1R2P3Q6NXS1 205 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 VSTM1Q6UX27 236 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 H2AFVQ71UI9 128 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 PIGZQ86VD9 579 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 MCOLN2Q8IZK6 566 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 STK32AQ8WU08 396 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 ATRIPQ8WXE1 791 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 NOX5Q96PH1 765 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 C11orf70Q9BRQ4 267 aa18.75■□□□□ 0.59
CCDC78-201ENST00000293889 EMILIN2Q9BXX0 1053 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms