RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 PDZK1P1A8MUH7 402 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 F8W810 466 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PRRG1O14668 218 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 SARSP49591 514 aaKnown RBP16.7■□□□□ 0.26
SSRP1-202ENST00000293880 TRAF2Q12933 501 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 ITGB3BPQ13352 177 aaPredicted RBP16.7■□□□□ 0.26
SSRP1-202ENST00000293880 DDI2Q5TDH0 399 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 TDRD5Q8NAT2 981 aaKnown RBP16.7■□□□□ 0.26
SSRP1-202ENST00000293880 RAD21L1Q9H4I0 556 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PSD3Q9NYI0 1048 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PPP1R3GB7ZBB8 358 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 ATP6V1G2O95670 118 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 TGM2P21980 687 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PRIM2P49643 509 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 AQP5P55064 265 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 KRT73Q86Y46 540 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 MAGEB18Q96M61 343 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 KLHL4Q9C0H6 718 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 HDHD2Q9H0R4 259 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 ATP6V1HQ9UI12 483 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 KDM7AQ6ZMT4 941 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 TMEM237Q96Q45 408 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 VCPKMTQ9H867 229 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 PAPOLBQ9NRJ5 636 aaKnown RBP16.7■□□□□ 0.26
SSRP1-202ENST00000293880 RIC8BQ9NVN3 520 aa16.7■□□□□ 0.26
SSRP1-202ENST00000293880 HEATR9A2RTY3 570 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 OR1G1P47890 313 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 NFYCQ13952 458 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 AASDHQ4L235 1098 aaPredicted RBP16.69■□□□□ 0.26
SSRP1-202ENST00000293880 MFSD14CQ5VZR4 134 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 CENPCQ03188 943 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 COX10Q12887 443 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 ARHGAP22Q7Z5H3 698 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 MAGEB10Q96LZ2 347 aaPredicted RBP16.69■□□□□ 0.26
SSRP1-202ENST00000293880 APOL2Q9BQE5 337 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 CHST12Q9NRB3 414 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 PRDM15P57071 1507 aaPredicted RBP16.69■□□□□ 0.26
SSRP1-202ENST00000293880 TRPC5OSA6NMA1 111 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 UBE2Q2LH0YL09 131 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 ABCB1P08183 1280 aaPredicted RBP16.69■□□□□ 0.26
SSRP1-202ENST00000293880 CCT3P49368 545 aaKnown RBP16.69■□□□□ 0.26
SSRP1-202ENST00000293880 EFCAB12Q6NXP0 572 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 CPB2Q96IY4 423 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 POLE3Q9NRF9 147 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 EVPLLA8MZ36 301 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 VWA5AO00534 786 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 FLT3P36888 993 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 EFNA5P52803 228 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 DCUN1D5Q9BTE7 237 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 ROPN1BQ9BZX4 212 aaPredicted RBP16.69■□□□□ 0.26
SSRP1-202ENST00000293880 CATSPERBQ9H7T0 1116 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 ROPN1Q9HAT0 212 aaPredicted RBP16.69■□□□□ 0.26
SSRP1-202ENST00000293880 GPRC5DQ9NZD1 345 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 SH3BP1Q9Y3L3 701 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 UBXN8O00124 270 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 ALDH1A1P00352 501 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 POP1Q99575 1024 aaKnown RBP16.69■□□□□ 0.26
SSRP1-202ENST00000293880 TMBIM4Q9HC24 238 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 KRT84Q9NSB2 600 aa16.69■□□□□ 0.26
SSRP1-202ENST00000293880 C1orf232A0A0U1RR37 186 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 SEMA3DO95025 777 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 FLT1P17948 1338 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 CHRNA5P30532 468 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 PDK1Q15118 436 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 DGKKQ5KSL6 1271 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 C11orf88Q6PI97 169 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 PRCCQ92733 491 aaPredicted RBP16.68■□□□□ 0.26
SSRP1-202ENST00000293880 TMEM79Q9BSE2 394 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 TAF6LQ9Y6J9 622 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 TRIM43BA6NCK2 446 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 ORC2Q13416 577 aaPredicted RBP16.68■□□□□ 0.26
SSRP1-202ENST00000293880 KLHL17Q6TDP4 642 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 KRT77Q7Z794 578 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 KCTD14Q9BQ13 255 aaPredicted RBP16.68■□□□□ 0.26
SSRP1-202ENST00000293880 RUSC1Q9BVN2 902 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 FAM129AQ9BZQ8 928 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 PARVBQ9HBI1 364 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 CRLS1Q9UJA2 301 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 NAGPAQ9UK23 515 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 PUDPQ08623 228 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 BMPR2Q13873 1038 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 PRUNE1Q86TP1 453 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 RBBP8Q99708 897 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 DYNC1LI2O43237 492 aaPredicted RBP16.68■□□□□ 0.26
SSRP1-202ENST00000293880 ASNA1O43681 348 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 FAM20BO75063 409 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 TMEM253P0C7T8 217 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 TRIM62Q9BVG3 475 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 CEP41Q9BYV8 373 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 C6orf62Q9GZU0 229 aaPredicted RBP16.68■□□□□ 0.26
SSRP1-202ENST00000293880 EIF3LQ9Y262 564 aaKnown RBP16.68■□□□□ 0.26
SSRP1-202ENST00000293880 TRIM13O60858 407 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
SSRP1-202ENST00000293880 ARF5P84085 180 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 UGP2Q16851 508 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 MIEF2Q96C03 454 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 SNX8Q9Y5X2 465 aa16.68■□□□□ 0.26
SSRP1-202ENST00000293880 IQCA1LA6NCM1 817 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms