RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 KCNT1Q5JUK3 1230 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 C10orf120Q5SQS8 335 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 HDDC2Q7Z4H3 204 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 PGBD3Q8N328 593 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 MYCBPAPQ8TBZ2 947 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 MOV10L1Q9BXT6 1211 aaKnown RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 PACSIN1Q9BY11 444 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 CRLS1Q9UJA2 301 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 CNTNAP5Q8WYK1 1306 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 TNPO2O14787 897 aaKnown RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 PDHBP11177 359 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 PRIM2P49643 509 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 PGS1Q32NB8 556 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 CDC42EP5Q6NZY7 148 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 FAM117BQ6P1L5 589 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 SUGP1Q8IWZ8 645 aaKnown RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 CINPQ9BW66 212 aaPredicted RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 PIF1Q9H611 641 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 SH3BP1Q9Y3L3 701 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 PARNO95453 639 aaKnown RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 RFX3P48380 749 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 CDC16Q13042 620 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 COG2Q14746 738 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 NMD3Q96D46 503 aaKnown RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 ZNF70Q9UC06 446 aaPredicted RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 FAM153AQ9UHL3 310 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 CNOT7Q9UIV1 285 aaKnown RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 KDM6AO15550 1401 aaPredicted RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 SOAT2O75908 522 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 FDX1P10109 184 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 SKIV2LQ15477 1246 aaKnown RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 L3MBTL3Q96JM7 780 aaPredicted RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 SPATA16Q9BXB7 569 aa18.64■□□□□ 0.57
COL5A3-201ENST00000264828 EPB41L4AQ9HCS5 686 aaPredicted RBP18.64■□□□□ 0.57
COL5A3-201ENST00000264828 CTDNEP1O95476 244 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 MAPK7Q13164 816 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 C10orf53Q8N6V4 93 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 VPS37AQ8NEZ2 397 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 SEPT1Q8WYJ6 367 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 CARD9Q9H257 536 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 IARS2Q9NSE4 1012 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 TRMT6Q9UJA5 497 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 EIF3LQ9Y262 564 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 TBX3O15119 743 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 CHI3L1P36222 383 aaPredicted RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 CSTF3Q12996 717 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 MTFR1Q15390 333 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 CYP51A1Q16850 503 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 NYAP1Q6ZVC0 841 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 TMBIM4Q9HC24 238 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 DOLKQ9UPQ8 538 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 USP42Q9H9J4 1324 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 IQCA1LA6NCM1 817 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 FDPSP14324 419 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 DENND1BQ6P3S1 775 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 ZNF677Q86XU0 584 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 TMEM120AQ9BXJ8 343 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 C10orf88Q9H8K7 445 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 TAF6LQ9Y6J9 622 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 OR1G1P47890 313 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 EFHC1Q5JVL4 640 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 MXRA8Q9BRK3 442 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 RPS6KL1Q9Y6S9 549 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 NR5A2O00482 541 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 GLRA3O75311 464 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 NR3C2P08235 984 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 OASLQ15646 514 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 EFL1Q7Z2Z2 1120 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 MTDHQ86UE4 582 aaKnown RBP18.63■□□□□ 0.57
COL5A3-201ENST00000264828 HIC2Q96JB3 615 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 KLHL25Q9H0H3 589 aa18.63■□□□□ 0.57
COL5A3-201ENST00000264828 RPS6KA5O75582 802 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 DDHD2O94830 711 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 EPHB2P29323 1055 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 STX5Q13190 355 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 PPP1R2P1Q96PQ5 205 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 PABPC3Q9H361 631 aaKnown RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 DNAJC16Q9Y2G8 782 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 NTSR2O95665 410 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 NPEPPSP55786 919 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 OTUD4Q01804 1114 aaKnown RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 TP53BP2Q13625 1128 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 R3HDM1Q15032 1099 aaKnown RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 C11orf63Q6NUN7 778 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 RUSC1Q9BVN2 902 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 M0QYT0 321 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 SMAPO00193 183 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 ATP6V1B2P21281 511 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 RFC5P40937 340 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 AQP5P55064 265 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 KPNB1Q14974 876 aaKnown RBP18.62■□□□□ 0.57
COL5A3-201ENST00000264828 NUDT18Q6ZVK8 323 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 ASZ1Q8WWH4 475 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 VCPKMTQ9H867 229 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 JMJD4Q9H9V9 463 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 GPATCH2LQ9NWQ4 482 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 GH1P01241 217 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 PON1P27169 355 aa18.62■□□□□ 0.57
COL5A3-201ENST00000264828 FNTAP49354 379 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms