RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CNPY1Q3B7I2 92 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 KBTBD12Q3ZCT8 623 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 RAB44Q7Z6P3 723 aaPredicted RBP15.67■□□□□ 0.1
CASC3-201ENST00000264645 SIX6OS1Q8N1H7 587 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 DIS3LQ8TF46 1054 aaKnown RBP15.67■□□□□ 0.1
CASC3-201ENST00000264645 NDEL1Q9GZM8 345 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 TASP1Q9H6P5 420 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 ZDHHC18Q9NUE0 388 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 SLC17A7Q9P2U7 560 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 SLC26A4O43511 780 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 PSMC5P62195 406 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 NCOA4Q13772 614 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 CDKL3Q8IVW4 592 aaPredicted RBP15.67■□□□□ 0.1
CASC3-201ENST00000264645 PREBQ9HCU5 417 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 KCNK4Q9NYG8 393 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 SAE1Q9UBE0 346 aaPredicted RBP15.67■□□□□ 0.1
CASC3-201ENST00000264645 DLG5Q8TDM6 1919 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 TISP43B9A030 160 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 SMAPO00193 183 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 ALDH1A3P47895 512 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 IGBP1P78318 339 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 ACVR2BQ13705 512 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 ECM1Q16610 540 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 CLEC16AQ2KHT3 1053 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 TMCO5AQ8N6Q1 288 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 HAS1Q92839 578 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 ITSN1Q15811 1721 aa15.67■□□□□ 0.1
CASC3-201ENST00000264645 NDUFB10O96000 172 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 DMPKQ09013 629 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 PRKG1Q13976 671 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 ATP13A4Q4VNC1 1196 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 SV2AQ7L0J3 742 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 RBM15BQ8NDT2 890 aaKnown RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 DACT3Q96B18 629 aaPredicted RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 RMND5BQ96G75 393 aaPredicted RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 CDRT15Q96T59 188 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 RMDN3Q96TC7 470 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 SUN2Q9UH99 717 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 ZMYM2Q9UBW7 1377 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 M0R3G1 203 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 KRT8P05787 483 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 C6orf222P0C671 652 aaPredicted RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 PKNOX1P55347 436 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 C21orf59P57076 290 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 DLG4P78352 724 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 FOLH1Q04609 750 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 SFSWAPQ12872 951 aaKnown RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 MAPRE2Q15555 327 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 COBLL1Q53SF7 1204 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 SWSAP1Q6NVH7 229 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 NANOGNBQ7Z5D8 188 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 TXNRD3Q86VQ6 643 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 CCDC33Q8N5R6 958 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 NAT14Q8WUY8 206 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 CEP19Q96LK0 163 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 C8orf37Q96NL8 207 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 FHDC1Q9C0D6 1143 aaPredicted RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 EFCAB1Q9HAE3 211 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 TBC1D22BQ9NU19 505 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 KCND2Q9NZV8 630 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 COG5Q9UP83 839 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 UMODL1Q5DID0 1318 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 RALBP11234 206 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 SLC12A3P55017 1021 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 UBAP2LQ14157 1087 aaKnown RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 INPP5AQ14642 412 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 ZNF677Q86XU0 584 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 TAS2R1Q9NYW7 299 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 DOLKQ9UPQ8 538 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 ADGRA3Q8IWK6 1321 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 FSCN2O14926 492 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 NTSR2O95665 410 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 PSAPP07602 524 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 HMOX2P30519 316 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 SERPINB1P30740 379 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 STIP1P31948 543 aaKnown RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 PPP3CAQ08209 521 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 ITGA9Q13797 1035 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 SF3B3Q15393 1217 aaKnown RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 ZSCAN18Q8TBC5 510 aaPredicted RBP15.66■□□□□ 0.1
CASC3-201ENST00000264645 VPS39Q96JC1 886 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 TMEM59LQ9UK28 342 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 LRRC42Q9Y546 428 aa15.66■□□□□ 0.1
CASC3-201ENST00000264645 C15orf38-AP3S2A0A0A6YYH1 394 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 CAPN8A6NHC0 703 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 PRR5-ARHGAP8B1AHC4 643 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 ADCY6O43306 1168 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 ABCD1P33897 745 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 WDR4P57081 412 aaKnown RBP15.65■□□□□ 0.1
CASC3-201ENST00000264645 ARHGAP8P85298 464 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 WDR72Q3MJ13 1102 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 MFSD4BQ5TF39 518 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 ARPINQ7Z6K5 226 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 SETD3Q86TU7 594 aaPredicted RBP15.65■□□□□ 0.1
CASC3-201ENST00000264645 ADCK1Q86TW2 530 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 ATP6V1E2Q96A05 226 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 PPP1R16BQ96T49 567 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 MED10Q9BTT4 135 aa15.65■□□□□ 0.1
CASC3-201ENST00000264645 ILKAPQ9H0C8 392 aaPredicted RBP15.65■□□□□ 0.1
CASC3-201ENST00000264645 SEMA6AQ9H2E6 1030 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms