RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 ITFG2Q969R8 447 aa15.22■□□□□ 0.03
FOXF1-201ENST00000262426 CAPNS2Q96L46 248 aa15.22■□□□□ 0.03
FOXF1-201ENST00000262426 RPS6KC1Q96S38 1066 aa15.22■□□□□ 0.03
FOXF1-201ENST00000262426 WNT8AQ9H1J5 351 aa15.22■□□□□ 0.03
FOXF1-201ENST00000262426 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
FOXF1-201ENST00000262426 SHBGP04278 402 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 ERBB2P04626 1255 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 ABL2P42684 1182 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 TAF5Q15542 800 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 UBXN11Q5T124 520 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 SH3PXD2AQ5TCZ1 1133 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 PHF13Q86YI8 300 aaPredicted RBP15.21■□□□□ 0.03
FOXF1-201ENST00000262426 ZNF784Q8NCA9 323 aaPredicted RBP15.21■□□□□ 0.03
FOXF1-201ENST00000262426 SNX27Q96L92 541 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 CHST7Q9NS84 486 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 PCSK1NQ9UHG2 260 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 R3HDM2Q9Y2K5 976 aaKnown RBP15.21■□□□□ 0.03
FOXF1-201ENST00000262426 TIMM13Q9Y5L4 95 aaPredicted RBP15.21■□□□□ 0.03
FOXF1-201ENST00000262426 MTA2O94776 668 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 NEFHP12036 1026 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 THPOP40225 353 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 ERFP50548 548 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 PSMC1P62191 440 aaKnown RBP15.21■□□□□ 0.03
FOXF1-201ENST00000262426 IFFO1Q0D2I5 559 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 PPP1R26Q5T8A7 1209 aaPredicted RBP15.21■□□□□ 0.03
FOXF1-201ENST00000262426 YTHDF3Q7Z739 585 aaKnown RBP15.21■□□□□ 0.03
FOXF1-201ENST00000262426 ZWILCHQ9H900 591 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 AGO3Q9H9G7 860 aaKnown RBP15.21■□□□□ 0.03
FOXF1-201ENST00000262426 GDF3Q9NR23 364 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 ABCF3Q9NUQ8 709 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 ST3GAL5Q9UNP4 418 aa15.21■□□□□ 0.03
FOXF1-201ENST00000262426 MIF4GDA9UHW6 222 aaKnown RBP15.21■□□□□ 0.02
FOXF1-201ENST00000262426 RALAP11233 206 aa15.21■□□□□ 0.02
FOXF1-201ENST00000262426 ADCY1Q08828 1119 aa15.21■□□□□ 0.02
FOXF1-201ENST00000262426 PLEKHA7Q6IQ23 1121 aa15.21■□□□□ 0.02
FOXF1-201ENST00000262426 SLC13A5Q86YT5 568 aaPredicted RBP15.21■□□□□ 0.02
FOXF1-201ENST00000262426 CCDC105Q8IYK2 499 aa15.21■□□□□ 0.02
FOXF1-201ENST00000262426 SMG8Q8ND04 991 aaKnown RBP15.21■□□□□ 0.02
FOXF1-201ENST00000262426 PARVAQ9NVD7 372 aa15.21■□□□□ 0.02
FOXF1-201ENST00000262426 PROSCO94903 275 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 CHRNA1P02708 482 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 GHRP10912 638 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 ATF7P17544 494 aaPredicted RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 PAPOLAP51003 745 aaKnown RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 SLC8A3P57103 927 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 DR1Q01658 176 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 CDO1Q16878 200 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 IQCKQ8N0W5 287 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 B3GNT5Q9BYG0 378 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 METTL5Q9NRN9 209 aaKnown RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 NOP53Q9NZM5 478 aaKnown RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 LMCD1Q9NZU5 365 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 TSPAN16Q9UKR8 245 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 ATP8B3O60423 1300 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 MGRN1O60291 552 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 ACAT1P24752 427 aaKnown RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 SP3Q02447 781 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 CCDC137Q6PK04 289 aaKnown RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 SMC1BQ8NDV3 1235 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 C10orf88Q9H8K7 445 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 SAE1Q9UBE0 346 aaPredicted RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 CES2O00748 559 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 ADORA2BP29275 332 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 SLCO1A2P46721 670 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 DEFB115Q30KQ5 88 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 DCAF4L1Q3SXM0 396 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 EZH1Q92800 747 aaPredicted RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 PAAF1Q9BRP4 392 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 MIS12Q9H081 205 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 AVENQ9NQS1 362 aaPredicted RBP15.2■□□□□ 0.02
FOXF1-201ENST00000262426 GTF2IRD1Q9UHL9 959 aa15.2■□□□□ 0.02
FOXF1-201ENST00000262426 CCDC130P13994 396 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 MLH1P40692 756 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 LRRC14Q15048 493 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 CCDC38Q502W7 563 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 TRIM72Q6ZMU5 477 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
FOXF1-201ENST00000262426 GAD1Q99259 594 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 MTG1Q9BT17 334 aaPredicted RBP15.19■□□□□ 0.02
FOXF1-201ENST00000262426 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 MRPL47Q9HD33 250 aaKnown RBP15.19■□□□□ 0.02
FOXF1-201ENST00000262426 DNAJC17Q9NVM6 304 aaKnown RBP15.19■□□□□ 0.02
FOXF1-201ENST00000262426 ITGA11Q9UKX5 1188 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 TMEM191CA6NGB0 347 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 SEPT4O43236 478 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 FGFR1P11362 822 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 ECHS1P30084 290 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 HSD17B3P37058 310 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 CRYBB1P53674 252 aaPredicted RBP15.19■□□□□ 0.02
FOXF1-201ENST00000262426 PLTPP55058 493 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 DYNLT1P63172 113 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
FOXF1-201ENST00000262426 DHX9Q08211 1270 aaKnown RBP15.19■□□□□ 0.02
FOXF1-201ENST00000262426 SOWAHAQ2M3V2 549 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 PPP1R15BQ5SWA1 713 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 RNF220Q5VTB9 566 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 C9orf57Q5W0N0 161 aa15.19■□□□□ 0.02
FOXF1-201ENST00000262426 SCUBE3Q8IX30 993 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms