RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SPDL1Q96EA4 605 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 NLNQ9BYT8 704 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 EPB41L4AQ9HCS5 686 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ABCB6Q9NP58 842 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 N4BP2Q86UW6 1770 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 LRRC10BA6NIK2 292 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 F5H5T6 163 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CA12O43570 354 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TBC1D4O60343 1298 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TLR2O60603 784 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CCND1P24385 295 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 HMOX2P30519 316 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF157P51786 506 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 GALCP54803 685 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ITPK1Q13572 414 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 HIC1Q14526 733 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PHKG1Q16816 387 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZFP1Q6P2D0 407 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 STOX1Q6ZVD7 989 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 LRRC6Q86X45 466 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF555Q8NEP9 628 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 XPO6Q96QU8 1125 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 KIF17Q9P2E2 1029 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 VPS51Q9UID3 782 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 EVPLLA8MZ36 301 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PPP1R3GB7ZBB8 358 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 VPS26AO75436 327 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CRY2Q49AN0 593 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 FASTKD1Q53R41 847 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CATSPER3Q86XQ3 398 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 LENG9Q96B70 501 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 QRFPRQ96P65 431 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CINPQ9BW66 212 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ST6GALNAC4Q9H4F1 302 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ACKR2O00590 384 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 URODP06132 367 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CYP2A6P11509 494 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SERPINB5P36952 375 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SYTL3Q4VX76 610 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 RGPD5Q99666 1765 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 H0Y626 953 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PRRG1O14668 218 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PMM2O15305 246 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TRIM16O95361 564 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ESRRBO95718 433 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 EPS8Q12929 822 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF177Q13360 481 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 KYAT3Q6YP21 454 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 OXER1Q8TDS5 423 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 GANCQ8TET4 914 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 HDAC7Q8WUI4 952 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PABPC3Q9H361 631 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TNPO3Q9Y5L0 923 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 KLHL41O60662 606 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 LARGE1O95461 756 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CYP11B1P15538 503 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SERPINB3P29508 390 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CYP27A1Q02318 531 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 STX3Q13277 289 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SCARA5Q6ZMJ2 495 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 FGD4Q96M96 766 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 RBM15Q96T37 977 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CDV3Q9UKY7 258 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 KCNN4O15554 427 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 AMHP03971 560 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 BRD2P25440 801 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ATP1A2P50993 1020 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 ANTXR2P58335 489 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SKOR1P84550 965 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CYTH1Q15438 398 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 SPANXN3Q5MJ09 141 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 KHDRBS2Q5VWX1 349 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 TTI2Q6NXR4 508 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 BRSK2Q8IWQ3 736 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 C2orf15Q8WU43 125 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 FNIP2Q9P278 1114 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PPARGC1AQ9UBK2 798 aaKnown RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 CORO1CQ9ULV4 474 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-202ENST00000261517 NEU2Q9Y3R4 380 aa4.48□□□□□ -1.69
VPS13C-202ENST00000261517 PPP1R37O75864 691 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CASP7P55210 303 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SULT2A1Q06520 285 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SLC27A1Q6PCB7 646 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PID1Q7Z2X4 250 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 BBS7Q8IWZ6 715 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ILKAPQ9H0C8 392 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 BAG2O95816 211 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ABHD2P08910 425 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MDH1P40925 334 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MARSP56192 900 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 RASIP1Q5U651 963 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 FBXO38Q6PIJ6 1188 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 KDM7AQ6ZMT4 941 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 NLRP14Q86W24 1093 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ING2Q9H160 280 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 NAGPAQ9UK23 515 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ANKRD36CQ5JPF3 1778 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 VCAM1P19320 739 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 GRK3P35626 688 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms