RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 LHX5Q9H2C1 402 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 TRABDQ9H4I3 376 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 KLK14Q9P0G3 267 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 ATXN2Q99700 1313 aaKnown RBP11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 H7C0C1 242 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 TSPAN1O60635 241 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 TRUB2O95900 331 aaKnown RBP11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 ITGAVP06756 1048 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 PDGFRBP09619 1106 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 MCF2P10911 925 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 ATP5OP48047 213 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 COPS2P61201 443 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 DNAJC3Q13217 504 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 SNAPC2Q13487 334 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 PPP6R3Q5H9R7 873 aaPredicted RBP11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 ZNF484Q5JVG2 852 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 PPP1R26Q5T8A7 1209 aaPredicted RBP11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 TRPM8Q7Z2W7 1104 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 TBC1D1Q86TI0 1168 aaPredicted RBP11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 NETO2Q8NC67 525 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 PCDH9Q9HC56 1237 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 CD248Q9HCU0 757 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 GGA2Q9UJY4 613 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 CHMP2BQ9UQN3 213 aa11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 DRG1Q9Y295 367 aaKnown RBP11.88□□□□□ -0.51
SLC3A1-201ENST00000260649 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 KAT6AQ92794 2004 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 AVILO75366 819 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 TMEM63AO94886 807 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 UBOX5O94941 541 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 CA4P22748 312 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 AKAP5P24588 427 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 YARSP54577 528 aaKnown RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 WDR4P57081 412 aaKnown RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 GPX6P59796 221 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 TNFAIP2Q03169 654 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 MORF4L2Q15014 288 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 GRIK4Q16099 956 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 MAMDC4Q6UXC1 1216 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 C3orf62Q6ZUJ4 267 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 NIPA2Q8N8Q9 360 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 FBXO36Q8NEA4 188 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 CXorf38Q8TB03 319 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 CKAP2Q8WWK9 683 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 MAML1Q92585 1016 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 NKD2Q969F2 451 aaPredicted RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 EIF2AQ9BY44 585 aaKnown RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 SLCO1B3Q9NPD5 702 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 TUBGCP4Q9UGJ1 667 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 XPO7Q9UIA9 1087 aaKnown RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 MCF2LO15068 1137 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 P4HA1P13674 534 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 TFE3P19532 575 aaPredicted RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 RPA3P35244 121 aaPredicted RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 ATXN1P54253 815 aaKnown RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 KRT81Q14533 505 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 ZNF268Q14587 947 aaPredicted RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 PMF1Q6P1K2 205 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 ARHGEF18Q6ZSZ5 1173 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 BBS12Q6ZW61 710 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 PALM2Q8IXS6 379 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 OR6B3Q8NGW1 331 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 CCHCR1Q8TD31 782 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 ZMAT2Q96NC0 199 aaKnown RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 OSMRQ99650 979 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 C16orf70Q9BSU1 422 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 KLC4Q9NSK0 619 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 BARX2Q9UMQ3 279 aaPredicted RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 USP15Q9Y4E8 981 aaPredicted RBP11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 PPME1Q9Y570 386 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 ANK1P16157 1881 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 A0A0G2JMZ2 1700 aa11.87□□□□□ -0.51
SLC3A1-201ENST00000260649 PRPSAP2O60256 369 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 VDRP11473 427 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 SMPD1P17405 629 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 GPD1P21695 349 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 ADORA2BP29275 332 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 SLC20A2Q08357 652 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 DPY19L2Q6NUT2 758 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 CATSPER4Q7RTX7 472 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 TRABD2AQ86V40 505 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 FBF1Q8TES7 1133 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 CLEC4CQ8WTT0 213 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 NT5C1AQ9BXI3 368 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 DPEP3Q9H4B8 488 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 ACTR5Q9H9F9 607 aaPredicted RBP11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 ASNSD1Q9NWL6 643 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 NR2E3Q9Y5X4 410 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 CLUHO75153 1309 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 FAM47DPA6NHR8 397 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 SNAI1O95863 264 aaPredicted RBP11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 RBP5P82980 135 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 CA9Q16790 459 aa11.86□□□□□ -0.51
SLC3A1-201ENST00000260649 DRICH1Q6PGQ1 229 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms