RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 CLASP2O75122 1294 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 E2F6O75461 281 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 NCAM1P13591 858 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 NFKB1P19838 968 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 KLRC1P26715 233 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PPP2R1BP30154 601 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SARSP49591 514 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 GEMP55040 296 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SH3BGRP55822 239 aaPredicted RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 MRPS22P82650 360 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 ACSM2AQ08AH3 577 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 C2orf27AQ580R0 203 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 HECTD3Q5T447 861 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 NEK5Q6P3R8 708 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 G2E3Q7L622 706 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 CYP2U1Q7Z449 544 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ZBED8Q8IZ13 594 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 KCNJ9Q92806 393 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 TMEM125Q96AQ2 219 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 LENG9Q96B70 501 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 C18orf8Q96DM3 657 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SERPINB11Q96P15 392 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PNKPQ96T60 521 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 SPATA9Q9BWV2 254 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 PDGFDQ9GZP0 370 aaPredicted RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 CLPBQ9H078 707 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 TMEM117Q9H0C3 514 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 BRD8Q9H0E9 1235 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 MYLK2Q9H1R3 596 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 CAPN10Q9HC96 672 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 ZCCHC17Q9NP64 241 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 FGFR1OP2Q9NVK5 253 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 GEMIN8Q9NWZ8 242 aaKnown RBP4.2□□□□□ -1.74
RNF38-201ENST00000259605 ALKBH4Q9NXW9 302 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 GTSE1Q9NYZ3 720 aa4.2□□□□□ -1.74
RNF38-201ENST00000259605 A0A0B4J269 797 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 CAPN14A8MX76 684 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 KCNJ18B7U540 433 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 IGF2BP3O00425 579 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNF38-201ENST00000259605 APOL1O14791 398 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 SEPT4O43236 478 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 ECEL1O95672 775 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 LMNAP02545 664 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 TCP1P17987 556 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 CDH2P19022 906 aaPredicted RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 CYP2A7P20853 494 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 CHRNB4P30926 498 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 IGFALSP35858 605 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 CCT5P48643 541 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 ZNF135P52742 658 aaPredicted RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 SNAP25P60880 206 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 COPZ1P61923 177 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 MRPS6P82932 125 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 MC1RQ01726 317 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 RGS1Q08116 209 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 KCNJ12Q14500 433 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 GRM4Q14833 912 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 LONRF1Q17RB8 773 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 TSNAXIP1Q2TAA8 658 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 NAPEPLDQ6IQ20 393 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 TYW1BQ6NUM6 668 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 ACAD11Q709F0 780 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 LYSMD3Q7Z3D4 306 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 FBXO33Q7Z6M2 555 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 CCDC60Q8IWA6 550 aaPredicted RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 FBXO16Q8IX29 292 aaPredicted RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 SLC22A17Q8WUG5 538 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 JADE3Q92613 823 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 PRCCQ92733 491 aaPredicted RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 SPDL1Q96EA4 605 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 C17orf62Q9BQA9 187 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 TRMT61BQ9BVS5 477 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 PUS3Q9BZE2 481 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 DCP1AQ9NPI6 582 aaPredicted RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 POLE4Q9NR33 117 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 KCNH7Q9NS40 1196 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 THEGQ9P2T0 379 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 RSPH14Q9UHP6 348 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 DDX41Q9UJV9 622 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 NENFQ9UMX5 172 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 NFASCO94856 1347 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 MYO1GB0I1T2 1018 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 B2RBV5 119 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 KPNA5O15131 536 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 TEX33O43247 280 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 LGR5O75473 907 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 ZRANB2O95218 330 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNF38-201ENST00000259605 MMP3P08254 477 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 SKILP12757 684 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 CASP14P31944 242 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 ATP5C1P36542 298 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 NUP107P57740 925 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 PLGLB1Q02325 96 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 OCA2Q04671 838 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 PTPN12Q05209 780 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 ELP6Q0PNE2 266 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 EFEMP1Q12805 493 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 ART3Q13508 389 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 MORC3Q14149 939 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 TAF13Q15543 124 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms