RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SLC22A12Q96S37 553 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 KCNK16Q96T55 309 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 MED10Q9BTT4 135 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 DLGAP2Q9P1A6 1054 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 COL4A2P08572 1712 aa24.4■■□□□ 1.5
LSM4-201ENST00000252816 SOBPA7XYQ1 873 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 CHADO15335 359 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 GLULP15104 373 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 CD58P19256 250 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 AVPR1AP37288 418 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 STX17P56962 302 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 FOXR2Q6PJQ5 311 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 CLEC17AQ6ZS10 378 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 CELF5Q8N6W0 485 aaKnown RBP24.39■■□□□ 1.49
LSM4-201ENST00000252816 DTWD2Q8NBA8 298 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 CCDC150Q8NCX0 1101 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 RIN3Q8TB24 985 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 BPIFB1Q8TDL5 484 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 WHAMMQ8TF30 809 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 TRPC7Q9HCX4 862 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 COQ4Q9Y3A0 265 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 F5P12259 2224 aa24.39■■□□□ 1.49
LSM4-201ENST00000252816 C2orf78A6NCI8 922 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 CILPO75339 1184 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 PAK1Q13153 545 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 UBXN2BQ14CS0 331 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 FRMD5Q7Z6J6 570 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 TRIML1Q8N9V2 468 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 SLC2A14Q8TDB8 520 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 TATDN2Q93075 761 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 SMARCD1Q96GM5 515 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 CYP2S1Q96SQ9 504 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 METTL14Q9HCE5 456 aaKnown RBP24.38■■□□□ 1.49
LSM4-201ENST00000252816 LTB4R2Q9NPC1 389 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 KRT82Q9NSB4 513 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 FAM49BQ9NUQ9 324 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 TDP1Q9NUW8 608 aa24.38■■□□□ 1.49
LSM4-201ENST00000252816 ATP8B3O60423 1300 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 TICRRQ7Z2Z1 1910 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 BICDL2A1A5D9 508 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 H0Y858 1186 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 ARHGAP29Q52LW3 1261 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 ZMIZ2Q8NF64 920 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 ARID3AQ99856 593 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 NT5C1AQ9BXI3 368 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 GCNT4Q9P109 453 aa24.37■■□□□ 1.49
LSM4-201ENST00000252816 ANAPC1Q9H1A4 1944 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 FAM170BA6NMN3 283 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 AP1G2O75843 785 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 BEST1O76090 585 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 TARSP26639 723 aaKnown RBP24.36■■□□□ 1.49
LSM4-201ENST00000252816 TAF10Q12962 218 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 CCDC40Q4G0X9 1142 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 ZNF852Q6ZMS4 543 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 NUP93Q8N1F7 819 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 ARL14EPQ8N8R7 260 aaPredicted RBP24.36■■□□□ 1.49
LSM4-201ENST00000252816 FAXDC2Q96IV6 333 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 SMOQ99835 787 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 CLSTN2Q9H4D0 955 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 DMAP1Q9NPF5 467 aaPredicted RBP24.36■■□□□ 1.49
LSM4-201ENST00000252816 EHD2Q9NZN4 543 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 TRPM5Q9NZQ8 1165 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 PIAS3Q9Y6X2 628 aa24.36■■□□□ 1.49
LSM4-201ENST00000252816 TRAV19A0A0A6YYK7 116 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 ZNF840PA6NDX5 716 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 TNFRSF10BO14763 440 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 TNK2Q07912 1038 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 IFRD2Q12894 506 aaPredicted RBP24.35■■□□□ 1.49
LSM4-201ENST00000252816 ZNF268Q14587 947 aaPredicted RBP24.35■■□□□ 1.49
LSM4-201ENST00000252816 WDR44Q5JSH3 913 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 SCAMP5Q8TAC9 235 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 CSGALNACT1Q8TDX6 532 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 OSBPL6Q9BZF3 934 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 KIF9Q9HAQ2 790 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 GTSE1Q9NYZ3 720 aa24.35■■□□□ 1.49
LSM4-201ENST00000252816 CKMP06732 381 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 USP17L7P0C7H9 530 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 ADORA2BP29275 332 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 SOX9P48436 509 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 FMO5P49326 533 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 ZNF394Q53GI3 561 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 ZNF687Q8N1G0 1237 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 TTC8Q8TAM2 541 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 CYFIP2Q96F07 1278 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 PHOX2BQ99453 314 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 HNRNPABQ99729 332 aaKnown RBP24.34■■□□□ 1.49
LSM4-201ENST00000252816 CSNK1G1Q9HCP0 422 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 GKN1Q9NS71 199 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 CISHQ9NSE2 258 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 LMBRD1Q9NUN5 540 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 FAM86C1Q9NVL1 165 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 IL37Q9NZH6 218 aa24.34■■□□□ 1.49
LSM4-201ENST00000252816 ZNF638Q14966 1978 aaKnown RBP24.34■■□□□ 1.49
LSM4-201ENST00000252816 RTN3O95197 1032 aaPredicted RBP24.33■■□□□ 1.49
LSM4-201ENST00000252816 HDCP19113 662 aa24.33■■□□□ 1.49
LSM4-201ENST00000252816 YWHAQP27348 245 aa24.33■■□□□ 1.49
LSM4-201ENST00000252816 SLC5A3P53794 718 aa24.33■■□□□ 1.49
LSM4-201ENST00000252816 MAP3K7CLP57077 242 aa24.33■■□□□ 1.49
LSM4-201ENST00000252816 PLCB2Q00722 1185 aa24.33■■□□□ 1.49
LSM4-201ENST00000252816 FZD5Q13467 585 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms