RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 EFR3BQ9Y2G0 817 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 KLF11O14901 512 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 BRD2P25440 801 aaKnown RBP16.22■□□□□ 0.19
DDX55-201ENST00000238146 IL1R2P27930 398 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 ZNF200P98182 395 aaPredicted RBP16.22■□□□□ 0.19
DDX55-201ENST00000238146 GSTA3Q16772 222 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 CDHR3Q6ZTQ4 885 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 POLNQ7Z5Q5 900 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 WDTC1Q8N5D0 677 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 ARFGAP1Q8N6T3 406 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 UBR7Q8N806 425 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 RBM15BQ8NDT2 890 aaKnown RBP16.22■□□□□ 0.19
DDX55-201ENST00000238146 FAM151AQ8WW52 585 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 TRIM4Q9C037 500 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 ZWILCHQ9H900 591 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
DDX55-201ENST00000238146 USP21Q9UK80 565 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 IKBKGQ9Y6K9 419 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 ENO1P06733 434 aaKnown RBP16.21■□□□□ 0.19
DDX55-201ENST00000238146 INHBAP08476 426 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 UBTFL6P0CB48 400 aaPredicted RBP16.21■□□□□ 0.19
DDX55-201ENST00000238146 NRLP54845 237 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 BASP1P80723 227 aaKnown RBP16.21■□□□□ 0.19
DDX55-201ENST00000238146 SLC25A11Q02978 314 aaKnown RBP16.21■□□□□ 0.19
DDX55-201ENST00000238146 CYP4A22Q5TCH4 519 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 EGFL6Q8IUX8 553 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 TTC13Q8NBP0 860 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 RDM1Q8NG50 284 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 DDX50Q9BQ39 737 aaKnown RBP16.21■□□□□ 0.19
DDX55-201ENST00000238146 PDP2Q9P2J9 529 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 ANGPTL2Q9UKU9 493 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 TELO2Q9Y4R8 837 aa16.21■□□□□ 0.19
DDX55-201ENST00000238146 KBTBD13C9JR72 458 aa16.21■□□□□ 0.18
DDX55-201ENST00000238146 LSM8O95777 96 aaKnown RBP16.21■□□□□ 0.18
DDX55-201ENST00000238146 ANPEPP15144 967 aa16.21■□□□□ 0.18
DDX55-201ENST00000238146 TAP1Q03518 808 aa16.21■□□□□ 0.18
DDX55-201ENST00000238146 NCOA4Q13772 614 aa16.21■□□□□ 0.18
DDX55-201ENST00000238146 FAM71DQ8N9W8 422 aa16.21■□□□□ 0.18
DDX55-201ENST00000238146 TMEM35BQ8NCS4 154 aa16.21■□□□□ 0.18
DDX55-201ENST00000238146 NR1H4Q96RI1 486 aaPredicted RBP16.21■□□□□ 0.18
DDX55-201ENST00000238146 SRPK1Q96SB4 655 aaKnown RBP16.21■□□□□ 0.18
DDX55-201ENST00000238146 KCNK4Q9NYG8 393 aa16.21■□□□□ 0.18
DDX55-201ENST00000238146 PLA2G4CQ9UP65 541 aa16.21■□□□□ 0.18
DDX55-201ENST00000238146 LYNP07948 512 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 CD48P09326 243 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 RFC1P35251 1148 aaPredicted RBP16.2■□□□□ 0.18
DDX55-201ENST00000238146 ERFP50548 548 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 ZNF394Q53GI3 561 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 GPAT2Q6NUI2 795 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 SWSAP1Q6NVH7 229 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 SCUBE1Q8IWY4 988 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 RNF217Q8TC41 542 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 CLPTM1LQ96KA5 538 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 PANX3Q96QZ0 392 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 CGRRF1Q99675 332 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 FRMD8P1Q9BZ68 369 aaPredicted RBP16.2■□□□□ 0.18
DDX55-201ENST00000238146 PXMP2Q9NR77 195 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 SEPT9Q9UHD8 586 aaPredicted RBP16.2■□□□□ 0.18
DDX55-201ENST00000238146 EP400Q96L91 3159 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 LRCH4O75427 683 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 KDELR1P24390 212 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 DPYSL3Q14195 570 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 RIPOR1Q6ZS17 1223 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 NET1Q7Z628 596 aaPredicted RBP16.2■□□□□ 0.18
DDX55-201ENST00000238146 SMC1BQ8NDV3 1235 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 ATP6V0A1Q93050 837 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 MECRQ9BV79 373 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 CYP26B1Q9NR63 512 aa16.2■□□□□ 0.18
DDX55-201ENST00000238146 CNTNAP2Q9UHC6 1331 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 H0YCG3 227 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 COPEO14579 308 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 FAM155BO75949 473 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 TM7SF2O76062 418 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 CST3P01034 146 aaPredicted RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 PSMA2P25787 234 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 RPS6KA3P51812 740 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 TAZQ16635 292 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 MDH1BQ5I0G3 518 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 IZUMO2Q6UXV1 221 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 PRPF39Q86UA1 669 aaKnown RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 MYLK4Q86YV6 388 aaPredicted RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 KIAA0319LQ8IZA0 1049 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 GBP5Q96PP8 586 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 FAM192AQ9GZU8 254 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 ASCC2Q9H1I8 757 aaPredicted RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 PPARGC1AQ9UBK2 798 aaKnown RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 SLC9A2Q9UBY0 812 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 TEX264Q9Y6I9 313 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 CNTNAP1P78357 1384 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 ZCCHC18P0CG32 403 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 ACTR3P61158 418 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 YWHAGP61981 247 aaKnown RBP eCLIP16.19■□□□□ 0.18
DDX55-201ENST00000238146 KDSRQ06136 332 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 BST1Q10588 318 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 TRMT5Q32P41 509 aaKnown RBP16.19■□□□□ 0.18
DDX55-201ENST00000238146 SEZ6Q53EL9 994 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 SLC27A3Q5K4L6 730 aa16.19■□□□□ 0.18
DDX55-201ENST00000238146 CES4AQ5XG92 561 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms