RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 UBA3Q8TBC4 463 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 SAMD15Q9P1V8 674 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 SAE1Q9UBE0 346 aaPredicted RBP16.95■□□□□ 0.3
UBE3D-201ENST00000237186 ZMYND8Q9ULU4 1186 aaPredicted RBP16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CAPN7Q9Y6W3 813 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 ZSWIM8A7E2V4 1837 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 EXOC1LA0A1B0GW35 172 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CCT8L1PA6NM43 557 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 E7ESA3 106 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 VIMP08670 466 aaKnown RBP16.95■□□□□ 0.3
UBE3D-201ENST00000237186 STIP1P31948 543 aaKnown RBP16.95■□□□□ 0.3
UBE3D-201ENST00000237186 RPL22P35268 128 aaKnown RBP16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CBLBQ13191 982 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 ACVR2BQ13705 512 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 PPP1R21Q6ZMI0 780 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 DPP9Q86TI2 863 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CNPY4Q8N129 248 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 BRI3BPQ8WY22 251 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 CPT1BQ92523 772 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 USP6NLQ92738 828 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 SGSM3Q96HU1 749 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 TINF2Q9BSI4 451 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 SLC4A5Q9BY07 1137 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 KCNK9Q9NPC2 374 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 SENP1Q9P0U3 644 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 PCSK1NQ9UHG2 260 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 SLC24A2Q9UI40 661 aa16.95■□□□□ 0.3
UBE3D-201ENST00000237186 DPYSL4O14531 572 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 SNX3O60493 162 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 OAS1P00973 400 aaKnown RBP16.94■□□□□ 0.3
UBE3D-201ENST00000237186 RDXP35241 583 aaKnown RBP16.94■□□□□ 0.3
UBE3D-201ENST00000237186 IFNAR2P48551 515 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 CTCFP49711 727 aaPredicted RBP16.94■□□□□ 0.3
UBE3D-201ENST00000237186 GDF10P55107 478 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 DYNLT1P63172 113 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 MKRN3Q13064 507 aaKnown RBP16.94■□□□□ 0.3
UBE3D-201ENST00000237186 FASTKD3Q14CZ7 662 aaKnown RBP16.94■□□□□ 0.3
UBE3D-201ENST00000237186 HIF1AQ16665 826 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 TMEM110Q86TL2 294 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 TRABD2AQ86V40 505 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 VSIG1Q86XK7 387 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 CCDC13Q8IYE1 715 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 LRRC52Q8N7C0 313 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 RXFP2Q8WXD0 754 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 RSAD2Q8WXG1 361 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 KAT2BQ92831 832 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 PEBP4Q96S96 227 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 RRAGCQ9HB90 399 aa16.94■□□□□ 0.3
UBE3D-201ENST00000237186 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 RASA4BC9J798 803 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 E5RJQ4 531 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 DNM1LO00429 736 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 RASA4O43374 803 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 PDGFRAP16234 1089 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 TSHRP16473 764 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 PDIA2Q13087 525 aaKnown RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 IRF5Q13568 498 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 LRRC14Q15048 493 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 BOLA3Q53S33 107 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 TRNP1Q6NT89 227 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 SLC27A1Q6PCB7 646 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 ALKAL1Q6UXT8 129 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 FAM183BPQ6ZVS7 135 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 RFX6Q8HWS3 928 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 OR6J1Q8NGC5 347 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 STK32AQ8WU08 396 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 SNX27Q96L92 541 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 MAGEB18Q96M61 343 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 NCAPGQ9BPX3 1015 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 ELAC2Q9BQ52 826 aaKnown RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 GCOM2Q9BZD3 368 aaPredicted RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 TBK1Q9UHD2 729 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 EVPLQ92817 2033 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 MCF2LO15068 1137 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 GPR32O75388 356 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 EIF3EP60228 445 aaKnown RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 FKBP1BP68106 108 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 TFDP2Q14188 446 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 TAF5Q15542 800 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 ZC3H12AQ5D1E8 599 aaKnown RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 FAM47CQ5HY64 1035 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 OR6B2Q6IFH4 312 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 UNC93AQ86WB7 457 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 UNC45BQ8IWX7 931 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 SRRM1Q8IYB3 904 aaKnown RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 ZBED8Q8IZ13 594 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 C12orf29Q8N999 325 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 SLC35F5Q8WV83 523 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 HSPH1Q92598 858 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 ZMAT2Q96NC0 199 aaKnown RBP16.93■□□□□ 0.3
UBE3D-201ENST00000237186 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 NKIRAS1Q9NYS0 192 aa16.93■□□□□ 0.3
UBE3D-201ENST00000237186 SMIM35A0A1B0GVV1 85 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 FAM47DPA6NHR8 397 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 FOXO6A8MYZ6 492 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 TCP11X1B4DZS4 312 aa16.92■□□□□ 0.3
UBE3D-201ENST00000237186 PRPF4O43172 522 aaKnown RBP eCLIP16.92■□□□□ 0.3
UBE3D-201ENST00000237186 RBP3P10745 1247 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms