RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 RASIP1Q5U651 963 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 ADGRG6Q86SQ4 1221 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 MCEEQ96PE7 176 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 FRMD8P1Q9BZ68 369 aaPredicted RBP14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 TAGLN3Q9UI15 199 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 HERC5Q9UII4 1024 aaKnown RBP14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 BUD23O43709 281 aaKnown RBP14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 EXTL3O43909 919 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 SOX10P56693 466 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 MTMR1Q13613 665 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 TBC1D25Q3MII6 688 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 CC2D2BQ6DHV5 1058 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 KYAT3Q6YP21 454 aaKnown RBP14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 NIPA2Q8N8Q9 360 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 MASTLQ96GX5 879 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 GJD4Q96KN9 370 aaPredicted RBP14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 VCX3BQ9H321 246 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 C10orf88Q9H8K7 445 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 VCX3AQ9NNX9 186 aa14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 SAE1Q9UBE0 346 aaPredicted RBP14.62□□□□□ -0.07
SCNN1A-201ENST00000228916 TCRBV9S1A1TA0A576 114 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CDK18Q07002 472 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 PIGHQ14442 188 aaPredicted RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 ANO5Q75V66 913 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 IGDCC3Q8IVU1 814 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CLPTM1LQ96KA5 538 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CENPKQ9BS16 269 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 ZDHHC7Q9NXF8 308 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 PPM1HQ9ULR3 514 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 PTPRJQ12913 1337 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 COL2A1P02458 1487 aaPredicted RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 SPECC1L-ADORA2AF8WAN1 911 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 RNASEH1O60930 286 aaKnown RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CALB1P05937 261 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 PIM1P11309 404 aaPredicted RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 TNNI1P19237 187 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 ZNF200P98182 395 aaPredicted RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 MTM1Q13496 603 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 KBTBD12Q3ZCT8 623 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 SLC27A3Q5K4L6 730 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CDHR3Q6ZTQ4 885 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 TAS1R3Q7RTX0 852 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 POLNQ7Z5Q5 900 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 FAM160B2Q86V87 743 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 ZNF606Q8WXB4 792 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 THTPAQ9BU02 230 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 C1orf21Q9H246 121 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 PPARGC1AQ9UBK2 798 aaKnown RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 XPO7Q9UIA9 1087 aaKnown RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CHMP2BQ9UQN3 213 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CLRN2A0PK11 232 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 INHBAP08476 426 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 STIP1P31948 543 aaKnown RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 DNAJC24Q6P3W2 148 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 ACAD11Q709F0 780 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 TTC13Q8NBP0 860 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 SRPK1Q96SB4 655 aaKnown RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 NDNQ99608 321 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 TTC1Q99614 292 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CCDC106Q9BWC9 280 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 UBE2OQ9C0C9 1292 aaKnown RBP14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 WWP1Q9H0M0 922 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 CCPG1Q9ULG6 757 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 IKBKGQ9Y6K9 419 aa14.61□□□□□ -0.07
SCNN1A-201ENST00000228916 FKBP6O75344 327 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 CCNE2O96020 404 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 JAK3P52333 1124 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 ZNF132P52740 706 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 TBCCQ15814 346 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 BBS12Q6ZW61 710 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 MARK2Q7KZI7 788 aaKnown RBP14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 MTBPQ96DY7 904 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 OLFM3Q96PB7 478 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 COMMD3-BMI1R4GMX3 469 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 WDR64B1ANS9 1081 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 I3L4J1 428 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 ATP5BP06576 529 aaKnown RBP14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 TBXAS1P24557 533 aaPredicted RBP14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 ELK3P41970 407 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 BST1Q10588 318 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 LSAMPQ13449 338 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 TAZQ16635 292 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 SPDYE2Q495Y8 402 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 C1orf146Q5VVC0 180 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 AAGABQ6PD74 315 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 DCUN1D2Q6PH85 259 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 TRIM42Q8IWZ5 723 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 FAM81AQ8TBF8 368 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 RSAD2Q8WXG1 361 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 CLEC4DQ8WXI8 215 aa14.6□□□□□ -0.07
SCNN1A-201ENST00000228916 COPEO14579 308 aa14.59□□□□□ -0.07
SCNN1A-201ENST00000228916 USP1O94782 785 aa14.59□□□□□ -0.07
SCNN1A-201ENST00000228916 C1QAP02745 245 aa14.59□□□□□ -0.07
SCNN1A-201ENST00000228916 DYNLT1P63172 113 aa14.59□□□□□ -0.07
SCNN1A-201ENST00000228916 TAP1Q03518 808 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms