RNA–Protein interactions for RNA: ENST00000223609.10

PRUNE2-201, Transcript of prune homolog 2, humanhuman

TSL 2 BASIC

Gene PRUNE2, Length 2,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-201ENST00000223609 FOXR2Q6PJQ5 311 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 SUGP1Q8IWZ8 645 aaKnown RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 B3GALNT2Q8NCR0 500 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 ZSCAN18Q8TBC5 510 aaPredicted RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 SMARCD2Q92925 531 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 ELSPBP1Q96BH3 223 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 BCO2Q9BYV7 579 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 PLA2G2FQ9BZM2 168 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 IMPG2Q9BZV3 1241 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 FAM117AQ9C073 453 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 ATXN3LQ9H3M9 355 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 SLITRK6Q9H5Y7 841 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 TRPV4Q9HBA0 871 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 APOBEC3GQ9HC16 384 aaKnown RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 MAGEC2Q9UBF1 373 aaPredicted RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 WNT16Q9UBV4 365 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 HMGXB4Q9UGU5 601 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 FBXL21Q9UKT6 434 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 TICRRQ7Z2Z1 1910 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 STX10O60499 249 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 TADA3O75528 432 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 CSH1P0DML2 217 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 CSH2P0DML3 217 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 PTPN1P18031 435 aaKnown RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 BDNFP23560 247 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 VCPP55072 806 aaKnown RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 CYP27A1Q02318 531 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 TAF12Q16514 161 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 DCAF17Q5H9S7 520 aaPredicted RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 TTI2Q6NXR4 508 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 VSTM1Q6UX27 236 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 TMEM150AQ86TG1 271 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 SCN4BQ8IWT1 228 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 SIX5Q8N196 739 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 TRIML1Q8N9V2 468 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 NELFBQ8WX92 580 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 TRMT2BQ96GJ1 504 aaKnown RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 GCNAQ96QF7 691 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 DUSP9Q99956 384 aaKnown RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 GPR88Q9GZN0 384 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 ELOVL4Q9GZR5 314 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 NIF3L1Q9GZT8 377 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 MFSD1Q9H3U5 465 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 ARHGEF3Q9NR81 526 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 CA14Q9ULX7 337 aa5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 HELZP42694 1942 aaKnown RBP5.55□□□□□ -1.52
PRUNE2-201ENST00000223609 ANAPC1Q9H1A4 1944 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 BICDL2A1A5D9 508 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 KRBA1A5PL33 1030 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 ANKRD62A6NC57 917 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 SLC38A8A6NNN8 435 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 TPD52L2O43399 206 aaKnown RBP5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 LRRN2O75325 713 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 NPR3P17342 541 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 VIPR2P41587 438 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 NLRP12P59046 1061 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 GPC5P78333 572 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 INCA1Q0VD86 236 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 PAK1Q13153 545 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 GRM2Q14416 872 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 CBWD6Q4V339 395 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 ARHGAP15Q53QZ3 475 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 CBWD3Q5JTY5 395 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 CBWD5Q5RIA9 395 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 GPR158Q5T848 1215 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 TCERG1LQ5VWI1 586 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 VITQ6UXI7 678 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 SCUBE3Q8IX30 993 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 FBXL13Q8NEE6 735 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 IPO4Q8TEX9 1081 aaKnown RBP5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 SEMA4DQ92854 862 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 SLC35C1Q96A29 364 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 RSPRY1Q96DX4 576 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 TNIP3Q96KP6 325 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 SPATA17Q96L03 361 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 MYRFLQ96LU7 910 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 CEP295NLQ96MC4 621 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 CEP63Q96MT8 703 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 B3GNT5Q9BYG0 378 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 ZNF518BQ9C0D4 1074 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 CLSTN2Q9H4D0 955 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 ZFP14Q9HCL3 533 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 TMEM30AQ9NV96 361 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 ARMCX3Q9UH62 379 aaPredicted RBP5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 MAGED2Q9UNF1 606 aaPredicted RBP5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 ZNF638Q14966 1978 aaKnown RBP5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 MYO16Q9Y6X6 1858 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 F8VP50 259 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 PRAMEF12O95522 483 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 F11P03951 625 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 ANXA13P27216 316 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 WEE1P30291 646 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 GRIK1P39086 918 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 NDST1P52848 882 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 CACNA2D1P54289 1103 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 ORC1Q13415 861 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 BRICD5Q6PL45 260 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 FRMD5Q7Z6J6 570 aa5.54□□□□□ -1.52
PRUNE2-201ENST00000223609 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms