RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 PEBP4Q96S96 227 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 TACO1Q9BSH4 297 aaKnown RBP15.32■□□□□ 0.04
CNOT3-201ENST00000221232 STRIP2Q9ULQ0 834 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 ABHD2P08910 425 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 GEMIN4P57678 1058 aaKnown RBP15.32■□□□□ 0.04
CNOT3-201ENST00000221232 MBTD1Q05BQ5 628 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 R3HDM1Q15032 1099 aaKnown RBP15.32■□□□□ 0.04
CNOT3-201ENST00000221232 PPIL6Q8IXY8 311 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 DENND1AQ8TEH3 1009 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 AGAP11Q8TF27 550 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 TMEM176AQ96HP8 235 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 PAFAH2Q99487 392 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 MAGEB5Q9BZ81 275 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 FZD8Q9H461 694 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 NPHS2Q9NP85 383 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 SLC17A7Q9P2U7 560 aa15.32■□□□□ 0.04
CNOT3-201ENST00000221232 MED7O43513 233 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 NEFHP12036 1026 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 INSRRP14616 1297 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 PDGFRAP16234 1089 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 TAP1Q03518 808 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 TMEM62Q0P6H9 643 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 KCTD2Q14681 263 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 PPP1R2P3Q6NXS1 205 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 FGD4Q96M96 766 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 PSMC3IPQ9P2W1 217 aaPredicted RBP15.31■□□□□ 0.04
CNOT3-201ENST00000221232 B4GALT4O60513 344 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 FAM155BO75949 473 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 GBP2P32456 591 aaPredicted RBP15.31■□□□□ 0.04
CNOT3-201ENST00000221232 MSH2P43246 934 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 NDST1P52848 882 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 YWHAGP61981 247 aaKnown RBP eCLIP15.31■□□□□ 0.04
CNOT3-201ENST00000221232 SURF1Q15526 300 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 TRNP1Q6NT89 227 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 NAT8LQ8N9F0 302 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 TCP10LQ8TDR4 215 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 RXFP2Q8WXD0 754 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 HPDLQ96IR7 371 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 MMP19Q99542 508 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 C2orf40Q9H1Z8 148 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 NGRNQ9NPE2 291 aaKnown RBP15.31■□□□□ 0.04
CNOT3-201ENST00000221232 RBPJLQ9UBG7 517 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 SHOC2Q9UQ13 582 aa15.31■□□□□ 0.04
CNOT3-201ENST00000221232 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
CNOT3-201ENST00000221232 E5RJQ4 531 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 CNMDO75829 334 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 TRUB2O95900 331 aaKnown RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 ZNF286BP0CG31 522 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 CDH5P33151 784 aaPredicted RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 ELK3P41970 407 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 DPYSL3Q14195 570 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 SMAD1Q15797 465 aaKnown RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 AMHR2Q16671 573 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 ZC3H12AQ5D1E8 599 aaKnown RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 BBS12Q6ZW61 710 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 NETO2Q8NC67 525 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 CFAP36Q96G28 342 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 LBHD1Q9BQE6 289 aaPredicted RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 TRIM56Q9BRZ2 755 aaKnown RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 IFT122Q9HBG6 1241 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 FAM49BQ9NUQ9 324 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 NR2E3Q9Y5X4 410 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 DOCK1Q14185 1865 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 MCF2LO15068 1137 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 CBX6O95503 412 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 EZRP15311 586 aaKnown RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 PROZP22891 400 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 NOL9Q5SY16 702 aaKnown RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 NIPA2Q8N8Q9 360 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 ZNF75CPQ92670 426 aaPredicted RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 FOXP3Q9BZS1 431 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 MIS12Q9H081 205 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 UBN1Q9NPG3 1134 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 CHKBQ9Y259 395 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 IGKV6-21A0A0C4DH24 114 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 CYP3A5P20815 502 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 SLC10A6Q3KNW5 377 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 PREPLQ4J6C6 727 aaPredicted RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 PPP6R3Q5H9R7 873 aaPredicted RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 SULF1Q8IWU6 871 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 SCUBE3Q8IX30 993 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 PDIK1LQ8N165 341 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 RIBC1Q8N443 379 aaPredicted RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.3■□□□□ 0.04
CNOT3-201ENST00000221232 LRRC37BQ96QE4 947 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 ACTL7BQ9Y614 415 aa15.3■□□□□ 0.04
CNOT3-201ENST00000221232 CFAP73A6NFT4 308 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 HCRTO43612 131 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 GPD2P43304 727 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 GRM1Q13255 1194 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 SETDB1Q15047 1291 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 OTOAQ7RTW8 1153 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 CTAGE3PQ8IX95 158 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 ATP11CQ8NB49 1132 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 GIMAP7Q8NHV1 300 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 NLRP7Q8WX94 980 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 FAF2Q96CS3 445 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 B3GNT5Q9BYG0 378 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 SMARCAD1Q9H4L7 1026 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 PARP14Q460N5 1801 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms