RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ARL2BPQ9Y2Y0 163 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 PCDHB5Q9Y5E4 795 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 MYO1GB0I1T2 1018 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 PRMT1Q99873 361 aaKnown RBP19.65■□□□□ 0.74
SMPD3-201ENST00000219334 MRPL9Q9BYD2 267 aaKnown RBP19.65■□□□□ 0.74
SMPD3-201ENST00000219334 NR2E3Q9Y5X4 410 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 KCNJ1P48048 391 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 LY6KQ17RY6 165 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 TLK2Q86UE8 772 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 ZFYVE19Q96K21 471 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 POMCP01189 267 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 SKOR1P84550 965 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 MTM1Q13496 603 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 USP50Q70EL3 339 aaPredicted RBP19.65■□□□□ 0.74
SMPD3-201ENST00000219334 UNC45BQ8IWX7 931 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 ZNF555Q8NEP9 628 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 TSEN34Q9BSV6 310 aaKnown RBP19.65■□□□□ 0.74
SMPD3-201ENST00000219334 GID8Q9NWU2 228 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 CHORDC1Q9UHD1 332 aaPredicted RBP19.65■□□□□ 0.74
SMPD3-201ENST00000219334 DYRK3O43781 588 aa19.64■□□□□ 0.74
SMPD3-201ENST00000219334 ADORA2AP29274 412 aa19.64■□□□□ 0.74
SMPD3-201ENST00000219334 KYNUQ16719 465 aa19.64■□□□□ 0.74
SMPD3-201ENST00000219334 LRIG3Q6UXM1 1119 aa19.64■□□□□ 0.74
SMPD3-201ENST00000219334 FAM172AQ8WUF8 416 aa19.64■□□□□ 0.74
SMPD3-201ENST00000219334 EPC1Q9H2F5 836 aa19.64■□□□□ 0.74
SMPD3-201ENST00000219334 CDY2AQ9Y6F7 541 aa19.64■□□□□ 0.74
SMPD3-201ENST00000219334 CDY1Q9Y6F8 540 aa19.64■□□□□ 0.74
SMPD3-201ENST00000219334 ADM5C9JUS6 153 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 FOXN3O00409 490 aaPredicted RBP19.64■□□□□ 0.73
SMPD3-201ENST00000219334 KLK7P49862 253 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 MFSD10Q14728 455 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 AGAP9Q5VTM2 703 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 WNT10BO00744 389 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 CTDNEP1O95476 244 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 GHRP10912 638 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 OAZ1P54368 228 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 MKRN4PQ13434 485 aaPredicted RBP19.64■□□□□ 0.73
SMPD3-201ENST00000219334 PGM5Q15124 567 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 CENPPQ6IPU0 288 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 RFX8Q6ZV50 586 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 BTN2A2Q8WVV5 523 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 FAM162AQ96A26 154 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 LNPEPQ9UIQ6 1025 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 RPS6KL1Q9Y6S9 549 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 CFAP73A6NFT4 308 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 NPHS2Q9NP85 383 aa19.64■□□□□ 0.73
SMPD3-201ENST00000219334 MADDQ8WXG6 1647 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 GRK3P35626 688 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 GRIN1Q05586 938 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 PPATQ06203 517 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 GIT2Q14161 759 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 CCNJLQ8IV13 435 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 TMEM176AQ96HP8 235 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 CLPBQ9H078 707 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 CAPN10Q9HC96 672 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 LMTK2Q8IWU2 1503 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 SGPL1O95470 568 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 VSNL1P62760 191 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 BST2Q10589 180 aaKnown RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 DDX39BQ13838 428 aaKnown RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 NBPF20Q3BBV1 942 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 MROH9Q5TGP6 573 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 ZNF513Q8N8E2 541 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 ABTB1Q969K4 478 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 P2RX7Q99572 595 aaKnown RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 THAP2Q9H0W7 228 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 DDX43Q9NXZ2 648 aaKnown RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 ITGA11Q9UKX5 1188 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 CEP152O94986 1710 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 PPP1R3GB7ZBB8 358 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 KLHL2O95198 593 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 COILP38432 576 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 CASP4P49662 377 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 GEMIN4P57678 1058 aaKnown RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 BBS7Q8IWZ6 715 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 SYT15Q9BQS2 421 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 ERP44Q9BS26 406 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 C17orf80Q9BSJ5 609 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 ASCC2Q9H1I8 757 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 SNTG2Q9NY99 539 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 DNAL1Q4LDG9 190 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 C16orf89Q6UX73 402 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 CLEC17AQ6ZS10 378 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 DENND5BQ6ZUT9 1274 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 KCNK16Q96T55 309 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 RBBP8Q99708 897 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 ROPN1BQ9BZX4 212 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 NDEL1Q9GZM8 345 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 FBXO44Q9H4M3 255 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 ROPN1Q9HAT0 212 aaPredicted RBP19.63■□□□□ 0.73
SMPD3-201ENST00000219334 ADAMTS13Q76LX8 1427 aa19.63■□□□□ 0.73
SMPD3-201ENST00000219334 CBX4O00257 560 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 HNRNPRO43390 633 aaKnown RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 XYLBO75191 536 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 PON1P27169 355 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 RIBC1Q8N443 379 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 KLF6Q99612 283 aaPredicted RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 RBM12Q9NTZ6 932 aaKnown RBP19.62■□□□□ 0.73
SMPD3-201ENST00000219334 CRTAMO95727 393 aa19.62■□□□□ 0.73
SMPD3-201ENST00000219334 ANXA11P50995 505 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms