RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 ATP9BO43861 1147 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 ZWINTO95229 277 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 SNRPAP09012 282 aaKnown RBP12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 GNL1P36915 607 aaPredicted RBP12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 ELK3P41970 407 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 MON1BQ7L1V2 547 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 NDUFAF2Q8N183 169 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 HIPK4Q8NE63 616 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 MANSC1Q9H8J5 431 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 ZFATQ9P243 1243 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 HAO1Q9UJM8 370 aa12.89□□□□□ -0.35
TM9SF4-201ENST00000217315 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 TMEM191CA6NGB0 347 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 E5RJQ4 531 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 CFHP08603 1231 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 CREB1P16220 341 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 CCL15Q16663 113 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 C15orf59Q2T9L4 293 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 FBXO41Q8TF61 875 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 BFARQ9NZS9 450 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 H3BRJ5 948 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 UNGP13051 313 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 ZNF268Q14587 947 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 TAF12Q16514 161 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 YTHDF3Q7Z739 585 aaKnown RBP12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 METTL23Q86XA0 190 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 FAM131BQ86XD5 332 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 FUKQ8N0W3 1084 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 ARMC2Q8NEN0 867 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 JOSD2Q8TAC2 188 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 OSMRQ99650 979 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 FAM167BQ9BTA0 163 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 SETD4Q9NVD3 440 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 BCORQ6W2J9 1755 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 MTA2O94776 668 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 NQO1P15559 274 aaKnown RBP12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 KDELR1P24390 212 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 SERPINB6P35237 376 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 PEX19P40855 299 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 RAD23BP54727 409 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 SEPT6Q14141 434 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 AGR3Q8TD06 166 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 FIS1Q9Y3D6 152 aa12.88□□□□□ -0.35
TM9SF4-201ENST00000217315 SRRM3A6NNA2 597 aaPredicted RBP12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 SP2Q02086 613 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 KDSRQ06136 332 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 ASPHQ12797 758 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 DGKDQ16760 1214 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 LBX2Q6XYB7 198 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 GPC2Q8N158 579 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 GABPB2Q8TAK5 448 aaPredicted RBP12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 ATXN2LQ8WWM7 1075 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 KIF9Q9HAQ2 790 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 SNTG2Q9NY99 539 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 SLC24A2Q9UI40 661 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 SIGLEC16A6NMB1 481 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 CTSHP09668 335 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 PTPN20Q4JDL3 420 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 NLRP9Q7RTR0 991 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 LONP2Q86WA8 852 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 FAM161BQ96MY7 647 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 VCXQ9H320 206 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 hCG_1818297A0A087WSY0 165 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 SMAPO00193 183 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 NFKBIEO00221 500 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 CA8P35219 290 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 ARL2P36404 184 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 NOTUMQ6P988 496 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 CKAP2Q8WWK9 683 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 ASB7Q9H672 318 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 PDGFCQ9NRA1 345 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 BTBD7Q9P203 1132 aa12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 APOBEC2Q9Y235 224 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-201ENST00000217315 SPAG6O75602 509 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 HSPA4LO95757 839 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 MCF2P10911 925 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 CPA2P48052 419 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 LRRC38Q5VT99 294 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 ARID3BQ8IVW6 561 aaPredicted RBP12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 KIAA0319LQ8IZA0 1049 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 TCP10LQ8TDR4 215 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 CAMKK2Q96RR4 588 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 KIAA1257Q9ULG3 409 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 TELO2Q9Y4R8 837 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 MAFBQ9Y5Q3 323 aaPredicted RBP12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
TM9SF4-201ENST00000217315 SPECC1L-ADORA2AF8WAN1 911 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms