RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 OLIG1Q8TAK6 271 aa12.96□□□□□ -0.33
SNU13-201ENST00000215956 DDX1Q92499 740 aaKnown RBP12.96□□□□□ -0.33
SNU13-201ENST00000215956 ZNF518BQ9C0D4 1074 aa12.96□□□□□ -0.33
SNU13-201ENST00000215956 CTTNBP2NLQ9P2B4 639 aa12.96□□□□□ -0.33
SNU13-201ENST00000215956 AMFRQ9UKV5 643 aa12.96□□□□□ -0.33
SNU13-201ENST00000215956 UBQLN1Q9UMX0 589 aaKnown RBP12.96□□□□□ -0.33
SNU13-201ENST00000215956 CACNA1IQ9P0X4 2223 aa12.96□□□□□ -0.34
SNU13-201ENST00000215956 GRID2IPA4D2P6 1211 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 CARNS1A5YM72 827 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 MTA2O94776 668 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 ITGB3P05106 788 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 PAEPP09466 180 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 ABCB4P21439 1286 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 ZNF132P52740 706 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 TNNC1P63316 161 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 CFAP221Q4G0U5 840 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 C11orf63Q6NUN7 778 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 PEX26Q7Z412 305 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 SLFN11Q7Z7L1 901 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 DDX53Q86TM3 631 aaKnown RBP12.95□□□□□ -0.34
SNU13-201ENST00000215956 KIAA2013Q8IYS2 634 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 LRRC52Q8N7C0 313 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 UBR7Q8N806 425 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 C1orf127Q8N9H9 656 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 MSANTD4Q8NCY6 345 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 SLC35G2Q8TBE7 412 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 RSPH1Q8WYR4 309 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 OSBPL9Q96SU4 736 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 XYLT2Q9H1B5 865 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 AVENQ9NQS1 362 aaPredicted RBP12.95□□□□□ -0.34
SNU13-201ENST00000215956 CISHQ9NSE2 258 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 DPP3Q9NY33 737 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 SALL4Q9UJQ4 1053 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 SPTBN2O15020 2390 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 MIF4GDA9UHW6 222 aaKnown RBP12.95□□□□□ -0.34
SNU13-201ENST00000215956 THAP12O43422 761 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 NARSO43776 548 aaKnown RBP12.95□□□□□ -0.34
SNU13-201ENST00000215956 CYP1A1P04798 512 aaPredicted RBP12.95□□□□□ -0.34
SNU13-201ENST00000215956 CYP1A2P05177 515 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 CYP3A5P20815 502 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 FGFR4P22455 802 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 MCM3P25205 808 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 PNPLA4P41247 253 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 ZNF572Q7Z3I7 529 aaPredicted RBP12.95□□□□□ -0.34
SNU13-201ENST00000215956 DAAM2Q86T65 1068 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 BCL7CQ8WUZ0 217 aaPredicted RBP12.95□□□□□ -0.34
SNU13-201ENST00000215956 ZNF653Q96CK0 615 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 HPDLQ96IR7 371 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 ZNF560Q96MR9 790 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 BCO2Q9BYV7 579 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 THAP2Q9H0W7 228 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 IGSF9Q9P2J2 1179 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 R4GN57 208 aa12.95□□□□□ -0.34
SNU13-201ENST00000215956 STK25O00506 426 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 KIF4AO95239 1232 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 CFHP08603 1231 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 SKIP12755 728 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 UNGP13051 313 aaPredicted RBP12.94□□□□□ -0.34
SNU13-201ENST00000215956 POLR2BP30876 1174 aaKnown RBP12.94□□□□□ -0.34
SNU13-201ENST00000215956 ASPAP45381 313 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 RAB27AP51159 221 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 CENPCQ03188 943 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 PUM1Q14671 1186 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNU13-201ENST00000215956 STILQ15468 1287 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 WDR72Q3MJ13 1102 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 TWF2Q6IBS0 349 aaKnown RBP12.94□□□□□ -0.34
SNU13-201ENST00000215956 RSRC2Q7L4I2 434 aaKnown RBP12.94□□□□□ -0.34
SNU13-201ENST00000215956 LRRC57Q8N9N7 239 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 TMEM35BQ8NCS4 154 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 PCDHB18PQ96TA0 734 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 ARID3AQ99856 593 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 HINFPQ9BQA5 517 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 TLR10Q9BXR5 811 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 MRPL47Q9HD33 250 aaKnown RBP12.94□□□□□ -0.34
SNU13-201ENST00000215956 SNTG2Q9NY99 539 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 WNT16Q9UBV4 365 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 SIX4Q9UIU6 781 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 KIAA1257Q9ULG3 409 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 AGAP1Q9UPQ3 857 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 SCINQ9Y6U3 715 aa12.94□□□□□ -0.34
SNU13-201ENST00000215956 MIA3Q5JRA6 1907 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 ACACBO00763 2458 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 KMT2BQ9UMN6 2715 aaPredicted RBP12.93□□□□□ -0.34
SNU13-201ENST00000215956 GPR179Q6PRD1 2367 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 CALB1P05937 261 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 GALTP07902 379 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 KCNE1P15382 129 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 CLCN4P51793 760 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
SNU13-201ENST00000215956 XKR4Q5GH76 650 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 UBL4BQ8N7F7 174 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 RIN2Q8WYP3 895 aaPredicted RBP12.93□□□□□ -0.34
SNU13-201ENST00000215956 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 RUBCNQ92622 972 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 LPPQ93052 612 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms