RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Krt31Q61765 416 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Olfml3Q8BK62 406 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Pum3Q8BKS9 647 aaKnown RBP12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Drd5Q8BLD9 478 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 AsphQ8BSY0 741 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 CgasQ8C6L5 507 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Fam161bQ8CB59 589 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Fbxo43Q8CDI2 640 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Kctd2Q8CEZ0 266 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Taf10Q8K0H5 218 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ace2Q8R0I0 805 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 CtbsQ8R242 366 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Snx9Q91VH2 595 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Lpin2Q99PI5 893 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 MlklQ9D2Y4 472 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 NumbQ9QZS3 653 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gm13090A2A899 111 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Prdm12A2AJ77 365 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Rasal2E9PW37 1286 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Zfp384E9Q1A5 584 aaKnown RBP12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Slc3a2P10852 526 aaKnown RBP12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ptger3P30557 365 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ptpn5P54830 541 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Hmgb4Q6P8W9 181 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 AtminQ6P9S1 818 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Mon1aQ6PDG8 556 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Olfr26Q7TRB7 308 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Tmem87aQ8BXN9 555 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 CcinQ8CDE2 588 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Znf276Q8CE64 614 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Zmiz2Q8CIE2 920 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Tmem134Q8R0J4 195 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Exoc1Q8R3S6 894 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gemin2Q9CQQ4 269 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ccdc43Q9CR29 222 aaKnown RBP12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Rnf6Q9DBU5 667 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Olfr933Q9EQA0 308 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Bex2Q9WTZ8 129 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Kcnd2Q9Z0V2 630 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Kmt2bO08550 2713 aa12.95□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Dpy19l4A2AJQ3 722 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 MndalD0QMC3 538 aaKnown RBP12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Vmn1r88E9Q235 316 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Edil3O35474 480 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ptch2O35595 1182 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cldn5O54942 218 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Mup5P11591 180 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Serpinh1P19324 417 aaKnown RBP12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ctnnd1P30999 938 aaKnown RBP12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Slc11a2P49282 568 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Serpina5P70458 405 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Nlrc4Q3UP24 1024 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cyfip2Q5SQX6 1253 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 BadQ61337 204 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Creb3Q61817 404 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 DazlQ64368 298 aaKnown RBP12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Frmd5Q6P5H6 517 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ddx10Q80Y44 875 aaKnown RBP12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Armcx3Q8BHS6 379 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Slco2b1Q8BXB6 683 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Slc7a14Q8BXR1 771 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gtpbp10Q8K013 366 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ces2aQ8QZR3 558 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Pcdhb15Q91Y04 786 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Ppp1r16aQ923M0 524 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 TMEM121BQ99MX7 572 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Fbxo32Q9CPU7 355 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Dusp10Q9ESS0 483 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Dkc1Q9ESX5 509 aaKnown RBP12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Trpc7Q9WVC5 862 aa12.94□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Znf106O88466 1888 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gm6657A0A1B0GRJ3 277 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Odf2A3KGV1 830 aaKnown RBP12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Vmn2r100E9QAZ9 850 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Aoc3O70423 765 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 DtnbO70585 659 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 C4bpaP08607 469 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Alkbh1P0CB42 389 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gadd45bP22339 160 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 CremP27699 357 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 InhbcP55104 352 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Sh3bp2Q06649 559 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Acot6Q32Q92 419 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Nom1Q3UFM5 854 aaKnown RBP12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gm29609Q3UU56 907 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Klra6Q60653 266 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Arnt2Q61324 712 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Dsg1aQ61495 1057 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Foxl1Q64731 336 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Wee2Q66JT0 555 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Retreg2Q6NS82 541 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Cacna2d2Q6PHS9 1154 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Olfr1415Q7TQS4 311 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Zbtb42Q811H0 420 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gtf3c2Q8BL74 907 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Traf3ip3Q8C0G2 513 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Gnl3Q8CI11 538 aaKnown RBP12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Lrrc3bQ8VCH9 259 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Olfr1416Q8VGU4 312 aa12.93□□□□□ -0.34
Ccdc28b-202ENSMUST00000106035 Sh2b1Q91ZM2 756 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms