RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeast

Gene ATG38, Length 681 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG38	YLR211C	YLR365W	Q7LIF2	110 aa		1.08	□□□□□ -2.24
ATG38	YLR211C	RPL36B	O14455	100 aa	Known RBP	1.07	□□□□□ -2.24
ATG38	YLR211C	RPL36A	P05745	100 aa	Predicted RBP	1.07	□□□□□ -2.24
ATG38	YLR211C	AIM4	P38305	123 aa	Predicted RBP	1.07	□□□□□ -2.24
ATG38	YLR211C	YIR020C	P40575	100 aa		1.07	□□□□□ -2.24
ATG38	YLR211C	YMR103C	Q04436	120 aa		1.07	□□□□□ -2.24
ATG38	YLR211C	SEN15	Q04675	128 aa		1.07	□□□□□ -2.24
ATG38	YLR211C	YLR194C	Q05777	254 aa		1.07	□□□□□ -2.24
ATG38	YLR211C	YPL261C	Q08976	102 aa		1.07	□□□□□ -2.24
ATG38	YLR211C	OST5	Q92316	86 aa		1.07	□□□□□ -2.24
ATG38	YLR211C	MED11	Q99278	115 aa		1.07	□□□□□ -2.24
ATG38	YLR211C	PFY1	P07274	126 aa		1.06	□□□□□ -2.24
ATG38	YLR211C	BUD23	P25627	275 aa	Predicted RBP	1.06	□□□□□ -2.24
ATG38	YLR211C	YIL014C-A	Q02598	104 aa		1.06	□□□□□ -2.24
ATG38	YLR211C	COA4	Q05809	96 aa		1.06	□□□□□ -2.24
ATG38	YLR211C	PAU2	P32612	120 aa		1.05	□□□□□ -2.24
ATG38	YLR211C	YNL122C	P53921	115 aa	Predicted RBP	1.05	□□□□□ -2.24
ATG38	YLR211C	KRE5	P22023	1365 aa		1.05	□□□□□ -2.24
ATG38	YLR211C	TY1B-H	O13535	1793 aa		1.04	□□□□□ -2.24
ATG38	YLR211C	PAU24	P38155	120 aa		1.04	□□□□□ -2.24
ATG38	YLR211C	COX23	P38824	151 aa		1.04	□□□□□ -2.24
ATG38	YLR211C	HUR1	P45820	110 aa		1.04	□□□□□ -2.24
ATG38	YLR211C	RPL22B	P56628	122 aa	Known RBP	1.04	□□□□□ -2.24
ATG38	YLR211C	YPL225W	Q08971	146 aa	Known RBP	1.04	□□□□□ -2.24
ATG38	YLR211C	MIC10	Q96VH5	97 aa		1.04	□□□□□ -2.24
ATG38	YLR211C	LYS2	P07702	1392 aa		1.04	□□□□□ -2.24
ATG38	YLR211C	YSF3	P0C074	85 aa	Predicted RBP	1.03	□□□□□ -2.24
ATG38	YLR211C	UBC4	P15731	148 aa		1.03	□□□□□ -2.24
ATG38	YLR211C	POR2	P40478	281 aa		1.03	□□□□□ -2.24
ATG38	YLR211C	GTT1	P40582	234 aa		1.03	□□□□□ -2.24
ATG38	YLR211C	DAD1	Q12248	94 aa		1.03	□□□□□ -2.24
ATG38	YLR211C	PCC1	Q3E833	88 aa		1.03	□□□□□ -2.24
ATG38	YLR211C	GSC2	P40989	1895 aa		1.03	□□□□□ -2.25
ATG38	YLR211C	HFA1	P32874	2273 aa		1.03	□□□□□ -2.25
ATG38	YLR211C	SRX1	P36077	127 aa		1.02	□□□□□ -2.25
ATG38	YLR211C	YAR064W	P39563	99 aa		1.02	□□□□□ -2.25
ATG38	YLR211C	YIL163C	P40448	117 aa		1.02	□□□□□ -2.25
ATG38	YLR211C	PDR11	P40550	1411 aa		1.02	□□□□□ -2.25
ATG38	YLR211C	SNN1	P48232	102 aa		1.02	□□□□□ -2.25
ATG38	YLR211C	YMR090W	Q04304	227 aa	Known RBP	1.02	□□□□□ -2.25
ATG38	YLR211C	HPA2	Q06592	156 aa		1.02	□□□□□ -2.25
ATG38	YLR211C	SWC7	Q06707	132 aa		1.02	□□□□□ -2.25
ATG38	YLR211C	YOS1	Q3E834	85 aa		1.02	□□□□□ -2.25
ATG38	YLR211C	TY3B-I	Q7LHG5	1498 aa	Known RBP	1.01	□□□□□ -2.25
ATG38	YLR211C	GEA1	P47102	1408 aa	Predicted RBP	1.01	□□□□□ -2.25
ATG38	YLR211C	PAU19	P0CE85	124 aa		1.01	□□□□□ -2.25
ATG38	YLR211C	YCR001W	P25347	104 aa		1.01	□□□□□ -2.25
ATG38	YLR211C	PAU3	P25610	124 aa		1.01	□□□□□ -2.25
ATG38	YLR211C	IRC21	Q04772	201 aa		1.01	□□□□□ -2.25
ATG38	YLR211C	KSH1	Q8TGJ3	72 aa		1.01	□□□□□ -2.25
ATG38	YLR211C	RPL22A	P05749	121 aa	Known RBP	1	□□□□□ -2.25
ATG38	YLR211C	YJL009W	P47078	108 aa		1	□□□□□ -2.25
ATG38	YLR211C	ZEO1	Q08245	113 aa		1	□□□□□ -2.25
ATG38	YLR211C	YLR285C-A	Q3E771	56 aa		1	□□□□□ -2.25
ATG38	YLR211C	ROM2	P51862	1356 aa	Known RBP	0.99	□□□□□ -2.25
ATG38	YLR211C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.99	□□□□□ -2.25
ATG38	YLR211C	HUA1	P40325	198 aa		0.99	□□□□□ -2.25
ATG38	YLR211C	VMA21	P41806	77 aa		0.99	□□□□□ -2.25
ATG38	YLR211C	CCW12	Q12127	133 aa		0.99	□□□□□ -2.25
ATG38	YLR211C	GEA2	P39993	1459 aa	Known RBP	0.99	□□□□□ -2.25
ATG38	YLR211C	YLR419W	Q06698	1435 aa	Known RBP	0.98	□□□□□ -2.25
ATG38	YLR211C	PAU16	P35994	123 aa		0.98	□□□□□ -2.25
ATG38	YLR211C	YBR013C	P38215	129 aa		0.98	□□□□□ -2.25
ATG38	YLR211C	CYB5	P40312	120 aa		0.98	□□□□□ -2.25
ATG38	YLR211C	PAU15	P40585	124 aa		0.98	□□□□□ -2.25
ATG38	YLR211C	MIC27	P50945	234 aa		0.98	□□□□□ -2.25
ATG38	YLR211C	MGR2	Q02889	113 aa		0.98	□□□□□ -2.25
ATG38	YLR211C	MIX14	Q04341	121 aa		0.98	□□□□□ -2.25
ATG38	YLR211C	FIT3	Q08907	204 aa		0.98	□□□□□ -2.25
ATG38	YLR211C	HMRA2	P0CY13	119 aa		0.97	□□□□□ -2.25
ATG38	YLR211C	ICS3	P47034	131 aa		0.97	□□□□□ -2.25
ATG38	YLR211C	MRPS12	P53732	153 aa		0.97	□□□□□ -2.25
ATG38	YLR211C	YLR363W-A	Q3E747	85 aa		0.97	□□□□□ -2.25
ATG38	YLR211C	YCL001W-B	Q96VH2	84 aa		0.97	□□□□□ -2.25
ATG38	YLR211C	REV3	P14284	1504 aa		0.97	□□□□□ -2.25
ATG38	YLR211C	DNA2	P38859	1522 aa		0.96	□□□□□ -2.26
ATG38	YLR211C	RPS22A	P0C0W1	130 aa	Known RBP	0.96	□□□□□ -2.26
ATG38	YLR211C	YIL102C	P40488	101 aa		0.96	□□□□□ -2.26
ATG38	YLR211C	VPS55	P47111	140 aa		0.96	□□□□□ -2.26
ATG38	YLR211C	YOR072W	Q08486	104 aa		0.96	□□□□□ -2.26
ATG38	YLR211C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.96	□□□□□ -2.26
ATG38	YLR211C	COA6	Q3E846	104 aa		0.96	□□□□□ -2.26
ATG38	YLR211C	CAT8	P39113	1433 aa		0.96	□□□□□ -2.26
ATG38	YLR211C	RSM19	P53733	91 aa	Predicted RBP	0.95	□□□□□ -2.26
ATG38	YLR211C	YMR321C	Q04898	105 aa		0.95	□□□□□ -2.26
ATG38	YLR211C	YCL048W-A	Q2V2Q2	79 aa		0.95	□□□□□ -2.26
ATG38	YLR211C	ENV10	Q99382	181 aa		0.95	□□□□□ -2.26
ATG38	YLR211C	SKI3	P17883	1432 aa	Known RBP	0.95	□□□□□ -2.26
ATG38	YLR211C	YMR007W	Q03675	126 aa		0.94	□□□□□ -2.26
ATG38	YLR211C	LSM6	Q06406	86 aa	Known RBP	0.94	□□□□□ -2.26
ATG38	YLR211C	YGL041C-B	Q3E750	60 aa		0.94	□□□□□ -2.26
ATG38	YLR211C	YGR240C-A	Q3E786	66 aa		0.94	□□□□□ -2.26
ATG38	YLR211C	RRT15	Q3E811	62 aa		0.94	□□□□□ -2.26
ATG38	YLR211C	YCR075W-A	Q3E830	75 aa		0.94	□□□□□ -2.26
ATG38	YLR211C	TY4B-J	P47024	1803 aa		0.94	□□□□□ -2.26
ATG38	YLR211C	SLH1	P53327	1967 aa	Known RBP	0.94	□□□□□ -2.26
ATG38	YLR211C	BPT1	P14772	1559 aa		0.93	□□□□□ -2.26
ATG38	YLR211C	CCW14	O13547	238 aa		0.93	□□□□□ -2.26
ATG38	YLR211C	MRPL31	P14063	131 aa	Predicted RBP	0.93	□□□□□ -2.26
ATG38	YLR211C	YHR138C	P38841	114 aa	Predicted RBP	0.93	□□□□□ -2.26

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