RNA–Protein interactions for RNA: YGR218W

CRM1, Transcript of Major karyopherin, yeast

Gene CRM1, Length 3,255 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CRM1	YGR218W	YLR365W	Q7LIF2	110 aa		0.93	□□□□□ -2.26
CRM1	YGR218W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.93	□□□□□ -2.26
CRM1	YGR218W	TDA2	P40045	126 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	YIR020C	P40575	100 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	YMR122C	Q03879	124 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	YMR103C	Q04436	120 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	OST5	Q92316	86 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	MED11	Q99278	115 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	YRF1-3	P0CX14	1859 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	YRF1-7	P0CX15	1859 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	YRF1-6	P53819	1859 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	PFY1	P07274	126 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	YHR130C	P38834	111 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	PRM3	Q08931	133 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	KRE5	P22023	1365 aa		0.92	□□□□□ -2.26
CRM1	YGR218W	AIM4	P38305	123 aa	Predicted RBP	0.91	□□□□□ -2.26
CRM1	YGR218W	YPL261C	Q08976	102 aa		0.91	□□□□□ -2.26
CRM1	YGR218W	LYS2	P07702	1392 aa		0.91	□□□□□ -2.26
CRM1	YGR218W	GEA1	P47102	1408 aa	Predicted RBP	0.91	□□□□□ -2.26
CRM1	YGR218W	BUD23	P25627	275 aa	Predicted RBP	0.91	□□□□□ -2.26
CRM1	YGR218W	ATG8	P38182	117 aa	RIP-Chip data	0.91	□□□□□ -2.26	not detected
CRM1	YGR218W	SEN15	Q04675	128 aa		0.91	□□□□□ -2.26
CRM1	YGR218W	HUA1	P40325	198 aa		0.91	□□□□□ -2.26
CRM1	YGR218W	YIL014C-A	Q02598	104 aa		0.91	□□□□□ -2.26
CRM1	YGR218W	RPL36B	O14455	100 aa	Known RBP	0.9	□□□□□ -2.26
CRM1	YGR218W	RPL36A	P05745	100 aa	Predicted RBP	0.9	□□□□□ -2.26
CRM1	YGR218W	YLR194C	Q05777	254 aa		0.9	□□□□□ -2.26
CRM1	YGR218W	COA4	Q05809	96 aa		0.9	□□□□□ -2.26
CRM1	YGR218W	BPT1	P14772	1559 aa		0.9	□□□□□ -2.27
CRM1	YGR218W	UBC4	P15731	148 aa		0.9	□□□□□ -2.27
CRM1	YGR218W	YNL122C	P53921	115 aa	Predicted RBP	0.9	□□□□□ -2.27
CRM1	YGR218W	YPL225W	Q08971	146 aa	Known RBP	0.9	□□□□□ -2.27
CRM1	YGR218W	PAU2	P32612	120 aa		0.9	□□□□□ -2.27
CRM1	YGR218W	HUR1	P45820	110 aa		0.9	□□□□□ -2.27
CRM1	YGR218W	MIC10	Q96VH5	97 aa		0.9	□□□□□ -2.27
CRM1	YGR218W	GTT1	P40582	234 aa		0.89	□□□□□ -2.27
CRM1	YGR218W	TY4B-J	P47024	1803 aa		0.89	□□□□□ -2.27
CRM1	YGR218W	PAU24	P38155	120 aa		0.89	□□□□□ -2.27
CRM1	YGR218W	COX23	P38824	151 aa		0.89	□□□□□ -2.27
CRM1	YGR218W	POR2	P40478	281 aa		0.89	□□□□□ -2.27
CRM1	YGR218W	RPL22B	P56628	122 aa	Known RBP	0.89	□□□□□ -2.27
CRM1	YGR218W	DAD1	Q12248	94 aa		0.89	□□□□□ -2.27
CRM1	YGR218W	YAR064W	P39563	99 aa		0.88	□□□□□ -2.27
CRM1	YGR218W	PCC1	Q3E833	88 aa		0.88	□□□□□ -2.27
CRM1	YGR218W	YOS1	Q3E834	85 aa		0.88	□□□□□ -2.27
CRM1	YGR218W	GEA2	P39993	1459 aa	Known RBP	0.88	□□□□□ -2.27
CRM1	YGR218W	YSF3	P0C074	85 aa	Predicted RBP	0.88	□□□□□ -2.27
CRM1	YGR218W	SRX1	P36077	127 aa		0.88	□□□□□ -2.27
CRM1	YGR218W	YMR090W	Q04304	227 aa	Known RBP	0.88	□□□□□ -2.27
CRM1	YGR218W	REV3	P14284	1504 aa		0.88	□□□□□ -2.27
CRM1	YGR218W	YLR419W	Q06698	1435 aa	Known RBP	0.88	□□□□□ -2.27
CRM1	YGR218W	YIL163C	P40448	117 aa		0.88	□□□□□ -2.27
CRM1	YGR218W	HPA2	Q06592	156 aa		0.88	□□□□□ -2.27
CRM1	YGR218W	SWC7	Q06707	132 aa		0.88	□□□□□ -2.27
CRM1	YGR218W	RPA190	P10964	1664 aa	Known RBP	0.87	□□□□□ -2.27
CRM1	YGR218W	DNA2	P38859	1522 aa		0.87	□□□□□ -2.27
CRM1	YGR218W	KSH1	Q8TGJ3	72 aa		0.87	□□□□□ -2.27
CRM1	YGR218W	PDR10	P51533	1564 aa		0.87	□□□□□ -2.27
CRM1	YGR218W	HFA1	P32874	2273 aa		0.87	□□□□□ -2.27
CRM1	YGR218W	IRC21	Q04772	201 aa		0.87	□□□□□ -2.27
CRM1	YGR218W	CCW12	Q12127	133 aa		0.87	□□□□□ -2.27
CRM1	YGR218W	SNN1	P48232	102 aa		0.86	□□□□□ -2.27
CRM1	YGR218W	ZEO1	Q08245	113 aa		0.86	□□□□□ -2.27
CRM1	YGR218W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.86	□□□□□ -2.27
CRM1	YGR218W	PAU19	P0CE85	124 aa		0.86	□□□□□ -2.27
CRM1	YGR218W	PAU3	P25610	124 aa		0.86	□□□□□ -2.27
CRM1	YGR218W	URB1	P34241	1764 aa	Known RBP	0.86	□□□□□ -2.27
CRM1	YGR218W	YCR001W	P25347	104 aa		0.86	□□□□□ -2.27
CRM1	YGR218W	YJL009W	P47078	108 aa		0.86	□□□□□ -2.27
CRM1	YGR218W	RPL37A	P49166	88 aa	Known RBP	0.86	□□□□□ -2.27
CRM1	YGR218W	RPL22A	P05749	121 aa	Known RBP	0.85	□□□□□ -2.27
CRM1	YGR218W	MIX14	Q04341	121 aa		0.85	□□□□□ -2.27
CRM1	YGR218W	CAT8	P39113	1433 aa		0.85	□□□□□ -2.27
CRM1	YGR218W	BNI1	P41832	1953 aa		0.85	□□□□□ -2.27
CRM1	YGR218W	VMA21	P41806	77 aa		0.85	□□□□□ -2.27
CRM1	YGR218W	YPK9	Q12697	1472 aa		0.85	□□□□□ -2.27
CRM1	YGR218W	ESC1	Q03661	1658 aa	Known RBP	0.85	□□□□□ -2.27
CRM1	YGR218W	SKI3	P17883	1432 aa	Known RBP	0.85	□□□□□ -2.27
CRM1	YGR218W	LCL2	Q08045	131 aa		0.84	□□□□□ -2.27
CRM1	YGR218W	YLR285C-A	Q3E771	56 aa		0.84	□□□□□ -2.27
CRM1	YGR218W	ROM2	P51862	1356 aa	Known RBP	0.84	□□□□□ -2.27
CRM1	YGR218W	YBR013C	P38215	129 aa		0.84	□□□□□ -2.27
CRM1	YGR218W	YOR072W	Q08486	104 aa		0.84	□□□□□ -2.27
CRM1	YGR218W	ICS3	P47034	131 aa		0.84	□□□□□ -2.28
CRM1	YGR218W	MGR2	Q02889	113 aa		0.84	□□□□□ -2.28
CRM1	YGR218W	FIT3	Q08907	204 aa		0.84	□□□□□ -2.28
CRM1	YGR218W	PAU16	P35994	123 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	PAU15	P40585	124 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	YCL001W-B	Q96VH2	84 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	MYO1	P08964	1928 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	CYB5	P40312	120 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	MIC27	P50945	234 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	YLR363W-A	Q3E747	85 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	COA6	Q3E846	104 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	YIL102C	P40488	101 aa		0.83	□□□□□ -2.28
CRM1	YGR218W	RPS22A	P0C0W1	130 aa	Known RBP	0.82	□□□□□ -2.28
CRM1	YGR218W	VPS55	P47111	140 aa		0.82	□□□□□ -2.28
CRM1	YGR218W	MRPS12	P53732	153 aa		0.82	□□□□□ -2.28
CRM1	YGR218W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.82	□□□□□ -2.28
CRM1	YGR218W	YCR075W-A	Q3E830	75 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 90.8 ms