RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CARD9Q9H257 536 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 TMEM39AQ9NV64 488 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 RNF216Q9NWF9 866 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-232ENST00000641947 RNF14Q9UBS8 474 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 HESX1Q9UBX0 185 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 F8VP50 259 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 BEST1O76090 585 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 SETSIPP0DME0 302 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 KRT3P12035 628 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 LHX1P48742 406 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 BCAT1P54687 386 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 ITIH3Q06033 890 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 DCUN1D2Q6PH85 259 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 TMEM110Q86TL2 294 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 RNPC3Q96LT9 517 aaKnown RBP18.55■□□□□ 0.56
PHGDH-232ENST00000641947 B3GNT5Q9BYG0 378 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 NRDE2Q9H7Z3 1164 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 TMEM30AQ9NV96 361 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 TMEM59LQ9UK28 342 aa18.55■□□□□ 0.56
PHGDH-232ENST00000641947 PRG3Q9Y2Y8 225 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-232ENST00000641947 CCDC66A2RUB6 948 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 RHOXF2BP0C7M4 288 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 PYGMP11217 842 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 MAN1A1P33908 653 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 SLC1A1P43005 524 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 PAFAH1B1P43034 410 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 OR1G1P47890 313 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 RPL34P49207 117 aaKnown RBP18.54■□□□□ 0.56
PHGDH-232ENST00000641947 RNASELQ05823 741 aaKnown RBP18.54■□□□□ 0.56
PHGDH-232ENST00000641947 UBL4BQ8N7F7 174 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 MSANTD4Q8NCY6 345 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 OR10T2Q8NGX3 314 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 IPO4Q8TEX9 1081 aaKnown RBP18.54■□□□□ 0.56
PHGDH-232ENST00000641947 RPGRIP1Q96KN7 1286 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 TMEM209Q96SK2 561 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 RHOXF2Q9BQY4 288 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.54■□□□□ 0.566e-10■■■■□ 22.4
PHGDH-232ENST00000641947 WDR35Q9P2L0 1181 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 IP6K2Q9UHH9 426 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 USTQ9Y2C2 406 aa18.54■□□□□ 0.56
PHGDH-232ENST00000641947 TRIM43BA6NCK2 446 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 PGRMC1O00264 195 aaKnown RBP18.53■□□□□ 0.56
PHGDH-232ENST00000641947 PAPSS1O43252 624 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-232ENST00000641947 RABGGTBP53611 331 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 CACNA2D1P54289 1103 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 TAP1Q03518 808 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 TAF5Q15542 800 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 FAM102AQ5T9C2 384 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-232ENST00000641947 OR6B2Q6IFH4 312 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 OLFML1Q6UWY5 402 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 ARFGAP1Q8N6T3 406 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 CLEC4CQ8WTT0 213 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 KHSRPQ92945 711 aaKnown RBP eCLIP18.53■□□□□ 0.56
PHGDH-232ENST00000641947 TRIM43Q96BQ3 446 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-232ENST00000641947 PCED1BQ96HM7 432 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 PNKPQ96T60 521 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 PKMYT1Q99640 499 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 KANSL3Q9P2N6 904 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 TTC7AQ9ULT0 858 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-232ENST00000641947 NR2E1Q9Y466 385 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 TMEM189-UBE2V1I3L0A0 370 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 PARNO95453 639 aaKnown RBP18.53■□□□□ 0.56
PHGDH-232ENST00000641947 FGGP02679 453 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 MRPS25P82663 173 aaKnown RBP18.53■□□□□ 0.56
PHGDH-232ENST00000641947 CLEC20AQ6ZU45 233 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 NPAS4Q8IUM7 802 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 SCUBE3Q8IX30 993 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 ABI1Q8IZP0 508 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 MMGT1Q8N4V1 131 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 NIPA2Q8N8Q9 360 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 STK32AQ8WU08 396 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 AP1M1Q9BXS5 423 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 DUSP16Q9BY84 665 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 RHOBTB2Q9BYZ6 727 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 TMLHEQ9NVH6 421 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 CDH9Q9ULB4 789 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 LRFN2Q9ULH4 789 aa18.53■□□□□ 0.56
PHGDH-232ENST00000641947 GRAP2O75791 330 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 PLA2G4AP47712 749 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 BCAR1P56945 870 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 TXNRD3NBQ6F5E7 133 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 FAM35AQ86V20 835 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 ZDHHC14Q8IZN3 488 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.52■□□□□ 0.55
PHGDH-232ENST00000641947 MYCBPAPQ8TBZ2 947 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 MARCH5Q9NX47 278 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 PCDHB8Q9UN66 801 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 KIAA1671Q9BY89 1806 aa18.52■□□□□ 0.55
PHGDH-232ENST00000641947 XPO1O14980 1071 aaKnown RBP18.51■□□□□ 0.55
PHGDH-232ENST00000641947 NPR3P17342 541 aa18.51■□□□□ 0.55
PHGDH-232ENST00000641947 FLT3P36888 993 aa18.51■□□□□ 0.55
PHGDH-232ENST00000641947 PBX3P40426 434 aa18.51■□□□□ 0.55
PHGDH-232ENST00000641947 PLCB3Q01970 1234 aa18.51■□□□□ 0.55
PHGDH-232ENST00000641947 RAB6CQ53S08 254 aa18.51■□□□□ 0.55
PHGDH-232ENST00000641947 INTS6LQ5JSJ4 861 aaKnown RBP18.51■□□□□ 0.55
PHGDH-232ENST00000641947 OVOS1Q6IE37 1185 aa18.51■□□□□ 0.55
PHGDH-232ENST00000641947 CC2D1AQ6P1N0 951 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-232ENST00000641947 CNKSR3Q6P9H4 555 aa18.51■□□□□ 0.55
PHGDH-232ENST00000641947 PIGZQ86VD9 579 aa18.51■□□□□ 0.55
PHGDH-232ENST00000641947 LRRTM3Q86VH5 581 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 302.1 ms