RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ATAD1Q8NBU5 361 aa18.49■□□□□ 0.55
PHGDH-230ENST00000641927 DUSP16Q9BY84 665 aa18.49■□□□□ 0.55
PHGDH-230ENST00000641927 LUC7LQ9NQ29 371 aaKnown RBP18.49■□□□□ 0.55
PHGDH-230ENST00000641927 ST7Q9NRC1 585 aa18.49■□□□□ 0.55
PHGDH-230ENST00000641927 PYCARDQ9ULZ3 195 aa18.49■□□□□ 0.55
PHGDH-230ENST00000641927 COLQQ9Y215 455 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-230ENST00000641927 WDR27A2RRH5 827 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 TEX28O15482 410 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 FTLP02792 175 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-230ENST00000641927 UNGP13051 313 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-230ENST00000641927 NPR3P17342 541 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 MAGEA1P43355 309 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 NDUFV1P49821 464 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 MAP3K7CLP57077 242 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 PDE4CQ08493 712 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 SMARCB1Q12824 385 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 ACAD10Q6JQN1 1059 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 GPR65Q8IYL9 337 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 WDTC1Q8N5D0 677 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 NOX5Q96PH1 765 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 SYNCQ9H7C4 482 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 PCDHGC5Q9Y5F6 944 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 PCDHA13Q9Y5I0 950 aa18.48■□□□□ 0.55
PHGDH-230ENST00000641927 MTMR11A4FU01 709 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 LILRB3O75022 631 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 RTN2O75298 545 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 LCA5LO95447 670 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CNPP09543 421 aaKnown RBP18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CCDC175P0C221 793 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 SETSIPP0DME0 302 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 GZMAP12544 262 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CYP2F1P24903 491 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 GRIK1P39086 918 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 GPD2P43304 727 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 ADCY1Q08828 1119 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 KIAA1328Q86T90 577 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 SCN4BQ8IWT1 228 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 GDPD5Q8WTR4 605 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 EMILIN2Q9BXX0 1053 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 NGRNQ9NPE2 291 aaKnown RBP18.47■□□□□ 0.55
PHGDH-230ENST00000641927 FNIP2Q9P278 1114 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 ADGRG1Q9Y653 693 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 C2orf71A6NGG8 1288 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 HIDE1A8MVS5 230 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 TULP2O00295 520 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 BEST1O76090 585 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 ABCB4P21439 1286 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CDH5P33151 784 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-230ENST00000641927 IRS1P35568 1242 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 RGS7P49802 495 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CACNA2D1P54289 1103 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CENPCQ03188 943 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 PDCLQ13371 301 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 MGAT5BQ3V5L5 792 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CFAP221Q4G0U5 840 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 PKDCCQ504Y2 493 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 C2CD6Q53TS8 623 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 C10orf76Q5T2E6 689 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 MMS22LQ6ZRQ5 1243 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CLEC20AQ6ZU45 233 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 ERICH1Q86X53 443 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 MRPL43Q8N983 215 aaKnown RBP18.47■□□□□ 0.55
PHGDH-230ENST00000641927 ZNF461Q8TAF7 563 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 SPPL2BQ8TCT7 592 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 FUBP3Q96I24 572 aaKnown RBP eCLIP18.47■□□□□ 0.55
PHGDH-230ENST00000641927 KCNK16Q96T55 309 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 SEPT5Q99719 369 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-230ENST00000641927 RXFP1Q9HBX9 757 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 CYTH4Q9UIA0 394 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 SLC27A5Q9Y2P5 690 aa18.47■□□□□ 0.55
PHGDH-230ENST00000641927 REXO2Q9Y3B8 237 aaKnown RBP18.47■□□□□ 0.55
PHGDH-230ENST00000641927 PIK3R2O00459 728 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 ADH1AP07327 375 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 KLRC2P26717 231 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 DUSP4Q13115 394 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 CAMK1Q14012 370 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 RAB33AQ14088 237 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 PMF1Q6P1K2 205 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 TTC9BQ8N6N2 239 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 MSANTD4Q8NCY6 345 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 C2orf15Q8WU43 125 aaKnown RBP18.46■□□□□ 0.55
PHGDH-230ENST00000641927 SLC35F5Q8WV83 523 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 PPP1R13BQ96KQ4 1090 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 KLHL5Q96PQ7 755 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 SMOQ99835 787 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 C11orf70Q9BRQ4 267 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 PACSIN1Q9BY11 444 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 DMAP1Q9NPF5 467 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-230ENST00000641927 ADAM22Q9P0K1 906 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 NENFQ9UMX5 172 aa18.46■□□□□ 0.55
PHGDH-230ENST00000641927 MYH10P35580 1976 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 A0A1W2PPC1 479 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 EPOPA6NHQ4 379 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 XPO1O14980 1071 aaKnown RBP18.45■□□□□ 0.54
PHGDH-230ENST00000641927 H2AFZP0C0S5 128 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 GALCP54803 685 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 TPGS2Q68CL5 300 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 PPP1R2P3Q6NXS1 205 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 H2AFVQ71UI9 128 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 PIGZQ86VD9 579 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms