RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 USP46P62068 366 aa23.16■■□□□ 1.3
SCN1B-206ENST00000638536 TPD52L1Q16890 204 aaPredicted RBP23.16■■□□□ 1.3
SCN1B-206ENST00000638536 FAM78AQ5JUQ0 283 aa23.16■■□□□ 1.3
SCN1B-206ENST00000638536 CAVIN1Q6NZI2 390 aaKnown RBP23.16■■□□□ 1.3
SCN1B-206ENST00000638536 FAM35AQ86V20 835 aa23.16■■□□□ 1.3
SCN1B-206ENST00000638536 KXD1Q9BQD3 176 aa23.16■■□□□ 1.3
SCN1B-206ENST00000638536 GDE1Q9NZC3 331 aa23.16■■□□□ 1.3
SCN1B-206ENST00000638536 IGSF9Q9P2J2 1179 aa23.16■■□□□ 1.3
SCN1B-206ENST00000638536 NCANO14594 1321 aa23.16■■□□□ 1.3
SCN1B-206ENST00000638536 BEST1O76090 585 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 FCARP24071 287 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 TDGQ13569 410 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 CUL2Q13617 745 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 TAF12Q16514 161 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 TANGO2Q6ICL3 276 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 SLC2A14Q8TDB8 520 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 NT5C1AQ9BXI3 368 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 THAP9Q9H5L6 903 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 TADA3O75528 432 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 NOL4O94818 638 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 CSH1P0DML2 217 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 CSH2P0DML3 217 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 SASS6Q6UVJ0 657 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 ARHGEF19Q8IW93 802 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 EHBP1Q8NDI1 1231 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 FAXDC2Q96IV6 333 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 CRACR2AQ9BSW2 395 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 MED10Q9BTT4 135 aa23.15■■□□□ 1.3
SCN1B-206ENST00000638536 P4HA2O15460 535 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 RAD23BP54727 409 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 APBA1Q02410 837 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 UBR7Q8N806 425 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 SLC4A11Q8NBS3 891 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 ZMIZ2Q8NF64 920 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 SPATA17Q96L03 361 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 C8orf48Q96LL4 319 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 MYRFLQ96LU7 910 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 ASB16Q96NS5 453 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 SMOQ99835 787 aa23.14■■□□□ 1.29
SCN1B-206ENST00000638536 NUP210Q8TEM1 1887 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-206ENST00000638536 ADORA2BP29275 332 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 VIPR2P41587 438 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 MTIF2P46199 727 aaKnown RBP23.13■■□□□ 1.29
SCN1B-206ENST00000638536 TRIM67Q6ZTA4 783 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 RRAGAQ7L523 313 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 ZSCAN18Q8TBC5 510 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-206ENST00000638536 RSPRY1Q96DX4 576 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 ASIC4Q96FT7 647 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 SLITRK6Q9H5Y7 841 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 KRT82Q9NSB4 513 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 NFE2L3Q9Y4A8 694 aa23.13■■□□□ 1.29
SCN1B-206ENST00000638536 CT47A1Q5JQC4 288 aaPredicted RBP23.12■■□□□ 1.29
SCN1B-206ENST00000638536 GPR158Q5T848 1215 aa23.12■■□□□ 1.29
SCN1B-206ENST00000638536 PPP1R26Q5T8A7 1209 aaPredicted RBP23.12■■□□□ 1.29
SCN1B-206ENST00000638536 PHLDB3Q6NSJ2 640 aa23.12■■□□□ 1.29
SCN1B-206ENST00000638536 ENOX1Q8TC92 643 aaKnown RBP23.12■■□□□ 1.29
SCN1B-206ENST00000638536 CYFIP2Q96F07 1278 aa23.12■■□□□ 1.29
SCN1B-206ENST00000638536 TRMT2BQ96GJ1 504 aaKnown RBP23.12■■□□□ 1.29
SCN1B-206ENST00000638536 NT5C1BQ96P26 610 aa23.12■■□□□ 1.29
SCN1B-206ENST00000638536 SLC46A2Q9BY10 475 aa23.12■■□□□ 1.29
SCN1B-206ENST00000638536 INTS2Q9H0H0 1204 aaKnown RBP23.12■■□□□ 1.29
SCN1B-206ENST00000638536 ANO10Q9NW15 660 aa23.12■■□□□ 1.29
SCN1B-206ENST00000638536 DUSP12Q9UNI6 340 aa23.12■■□□□ 1.29
SCN1B-206ENST00000638536 PATJQ8NI35 1801 aa23.12■■□□□ 1.29
SCN1B-206ENST00000638536 TRIM66O15016 1216 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 AP1G2O75843 785 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 ACO1P21399 889 aaKnown RBP23.11■■□□□ 1.29
SCN1B-206ENST00000638536 STX1AQ16623 288 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 MIIPQ5JXC2 388 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 IER5LQ5T953 404 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 TXNDC8Q6A555 127 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 DENND5BQ6ZUT9 1274 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 PPM1KQ8N3J5 372 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 NXPE3Q969Y0 559 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 SMG9Q9H0W8 520 aaKnown RBP23.11■■□□□ 1.29
SCN1B-206ENST00000638536 COL4A3Q01955 1670 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 RNF225M0QZC1 329 aaPredicted RBP23.11■■□□□ 1.29
SCN1B-206ENST00000638536 SLC9A1P19634 815 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 ANXA13P27216 316 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 CDC25CP30307 473 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 TYRO3Q06418 890 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 SIGLEC14Q08ET2 396 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 GJB7Q6PEY0 223 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 MTSS1LQ765P7 747 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 ARID3BQ8IVW6 561 aaPredicted RBP23.11■■□□□ 1.29
SCN1B-206ENST00000638536 SCAMP5Q8TAC9 235 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 SMARCD2Q92925 531 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 SMARCD1Q96GM5 515 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 TMEM176AQ96HP8 235 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 HEXIM2Q96MH2 286 aaKnown RBP23.11■■□□□ 1.29
SCN1B-206ENST00000638536 KREMEN1Q96MU8 473 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 LRRC3BQ96PB8 259 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 HNRNPABQ99729 332 aaKnown RBP23.11■■□□□ 1.29
SCN1B-206ENST00000638536 GCNT4Q9P109 453 aa23.11■■□□□ 1.29
SCN1B-206ENST00000638536 KCNJ18B7U540 433 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 TNFRSF10BO14763 440 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 PDGFBP01127 241 aaPredicted RBP23.1■■□□□ 1.29
SCN1B-206ENST00000638536 CALCAP01258 141 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 MAP3K7CLP57077 242 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 GPC5P78333 572 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms