RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SLC39A10Q9ULF5 831 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 TMX2Q9Y320 296 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 SPATA31A5Q5VU36 1347 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 SPATA31A7Q8IWB4 1347 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 DCDC2CA8MYV0 355 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 XPO1O14980 1071 aaKnown RBP16.51■□□□□ 0.23
CLN5-218ENST00000637397 FGRP09769 529 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 MYL6P60660 151 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 TBCCQ15814 346 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 PDCD2Q16342 344 aaPredicted RBP16.51■□□□□ 0.23
CLN5-218ENST00000637397 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 HPDLQ96IR7 371 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 GJD4Q96KN9 370 aaPredicted RBP16.51■□□□□ 0.23
CLN5-218ENST00000637397 TNIP3Q96KP6 325 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 RPS6KL1Q9Y6S9 549 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 SYCE1LA8MT33 242 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 LAYNQ6UX15 382 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 GPRASP2Q96D09 838 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 NOL4O94818 638 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 UNC5CO95185 931 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 KRT16P08779 473 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 RPA3P35244 121 aaPredicted RBP16.51■□□□□ 0.23
CLN5-218ENST00000637397 SOX11P35716 441 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
CLN5-218ENST00000637397 ZBTB17Q13105 803 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 TAGLN3Q9UI15 199 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 SNX5Q9Y5X3 404 aa16.51■□□□□ 0.23
CLN5-218ENST00000637397 OGTO15294 1046 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 GCNT1Q02742 428 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 CRELD2Q6UXH1 353 aaPredicted RBP16.5■□□□□ 0.23
CLN5-218ENST00000637397 PTPRN2Q92932 1015 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 VPS33BQ9H267 617 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 NEUROG2Q9H2A3 272 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 RNPEPL1Q9HAU8 725 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 SNX2O60749 519 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 NLRP11P59045 1033 aaKnown RBP16.5■□□□□ 0.23
CLN5-218ENST00000637397 SLC34A1Q06495 639 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 ZNF280CQ8ND82 737 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLN5-218ENST00000637397 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
CLN5-218ENST00000637397 CNBD2Q96M20 576 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 ZBTB18Q99592 522 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 EPAS1Q99814 870 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 CCT7Q99832 543 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 MAGEB5Q9BZ81 275 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 IKZF4Q9H2S9 585 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 LRCH1Q9Y2L9 728 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 AFF2P51816 1311 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 CHKAP35790 457 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 DCAF6Q58WW2 860 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 PRAMEF18Q5VWM3 479 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 ANKRD27Q96NW4 1050 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 AGO4Q9HCK5 861 aaKnown RBP16.5■□□□□ 0.23
CLN5-218ENST00000637397 ERVK-5Q9HDB9 667 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 USP18Q9UMW8 372 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 ATP8B3O60423 1300 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 MEIS2O14770 477 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 LCA5LO95447 670 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 SLURP2P0DP57 97 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 FECHP22830 423 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 MMP13P45452 471 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 RHBDL3P58872 404 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 GOLGA7BQ2TAP0 167 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 ZBTB41Q5SVQ8 909 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 IER5Q5VY09 327 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 XRRA1Q6P2D8 792 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 ZSWIM2Q8NEG5 633 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 IFT43Q96FT9 208 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 CGRRF1Q99675 332 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 FRMD8P1Q9BZ68 369 aaPredicted RBP16.5■□□□□ 0.23
CLN5-218ENST00000637397 C10orf88Q9H8K7 445 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 SARS2Q9NP81 518 aaKnown RBP16.5■□□□□ 0.23
CLN5-218ENST00000637397 CDYLQ9Y232 598 aa16.5■□□□□ 0.23
CLN5-218ENST00000637397 UBA6A0AVT1 1052 aaPredicted RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 ANGPT2O15123 496 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 GLRA3O75311 464 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 SERPINB5P36952 375 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 RPL10AP62906 217 aaKnown RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 SPOUT1Q5T280 376 aaKnown RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 DPY19L2Q6NUT2 758 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 PRUNE1Q86TP1 453 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 APLFQ8IW19 511 aaPredicted RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 PLEKHA5Q9HAU0 1116 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 STX18Q9P2W9 335 aaKnown RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 NCANO14594 1321 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 CAP2P40123 477 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 PDK1Q15118 436 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 UGP2Q16851 508 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 DENND5BQ6ZUT9 1274 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 TMPRSS6Q8IU80 811 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 ZCCHC9Q8N567 271 aaKnown RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 ZNF518BQ9C0D4 1074 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 IL18RAPO95256 599 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 GYS1P13807 737 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 TRMT5Q32P41 509 aaKnown RBP16.49■□□□□ 0.23
CLN5-218ENST00000637397 ARSHQ5FYA8 562 aa16.49■□□□□ 0.23
CLN5-218ENST00000637397 PDCD6IPQ8WUM4 868 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms