RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 HTD2P86397 168 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ACTN3Q08043 901 aaPredicted RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 TMEM62Q0P6H9 643 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 KLF10Q13118 480 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 HNRNPA0Q13151 305 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 TRPC3Q13507 836 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PDIA5Q14554 519 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PLS1Q14651 629 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 RCN1Q15293 331 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SURF1Q15526 300 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ADIPOQQ15848 244 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CWF19L2Q2TBE0 894 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 FBXO47Q5MNV8 452 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PM20D1Q6GTS8 502 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 NAA16Q6N069 864 aaPredicted RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 JMJD6Q6NYC1 403 aaPredicted RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 KLC3Q6P597 504 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 GALNT18Q6P9A2 607 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 DCLRE1AQ6PJP8 1040 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CORO6Q6QEF8 472 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 VHLLQ6RSH7 139 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SEPT14Q6ZU15 432 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 C15orf52Q6ZUT6 534 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 TAOK1Q7L7X3 1001 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PIWIL3Q7Z3Z3 882 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 SLFN11Q7Z7L1 901 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PRPF39Q86UA1 669 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 SLCO6A1Q86UG4 719 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SCUBE1Q8IWY4 988 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 EFCAB13Q8IY85 973 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SYTL1Q8IYJ3 562 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 KIAA0319LQ8IZA0 1049 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CARFQ8N187 725 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 REXO1Q8N1G1 1221 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 KCTD6Q8NC69 237 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 DAGLBQ8NCG7 672 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 LINC00116Q8NCU8 138 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 GMCL1P1Q8NEA9 526 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ERMNQ8TAM6 284 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ETNPPLQ8TBG4 499 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 AGR3Q8TD06 166 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CREB3L4Q8TEY5 395 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SEPT1Q8WYJ6 367 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 DIO2Q92813 273 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 TNPO1Q92973 898 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 VPS50Q96JG6 964 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 MAELQ96JY0 434 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 TEKT5Q96M29 485 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 AK8Q96MA6 479 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 TCEANC2Q96MN5 208 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 TXN2Q99757 166 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 UQCC2Q9BRT2 126 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ZNF747Q9BV97 191 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SORBS1Q9BX66 1292 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 ASPNQ9BXN1 380 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 AGXT2Q9BYV1 514 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 NACAP1Q9BZK3 213 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 NSRP1Q9H0G5 558 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 NUP62CLQ9H1M0 184 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 WDR26Q9H7D7 661 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PARVGQ9HBI0 331 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 GPR108Q9NPR9 543 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 C14orf119Q9NWQ9 140 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 NMRK1Q9NWW6 199 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 TAS2R3Q9NYW6 316 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 COQ3Q9NZJ6 369 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 AKAP7Q9P0M2 348 aaPredicted RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 ACTR3BQ9P1U1 418 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 UBA2Q9UBT2 640 aaPredicted RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 NDOR1Q9UHB4 597 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 FAM153AQ9UHL3 310 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ST6GALNAC2Q9UJ37 374 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 HOOK1Q9UJC3 728 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 ACSL6Q9UKU0 697 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CLEC4AQ9UMR7 237 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PCDHGB4Q9UN71 923 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CORO2BQ9UQ03 480 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 INVSQ9Y283 1065 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CARD8Q9Y2G2 431 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SIK3Q9Y2K2 1263 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 PMF1-BGLAPU3KQ54 211 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 MROH5Q6ZUA9 1318 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 RAD50Q92878 1312 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 LTBP3Q9NS15 1303 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 A0A1W2PQU0 124 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 LRRIQ4A6NIV6 560 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 RHPN2P1A8MT19 583 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ZNF891A8MT65 544 aaPredicted RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 EBAG9O00559 213 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 NPC1O15118 1278 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 MAGEB3O15480 346 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 POLR2DO15514 142 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 FFAR2O15552 330 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 SPOPO43791 374 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 SYNCRIPO60506 623 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 KCNJ13O60928 360 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ERLIN1O75477 346 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ERAL1O75616 437 aaKnown RBP3.22□□□□□ -1.89
VIM-210ENST00000637053 GJB3O75712 270 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms