RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 RSAD2Q8WXG1 361 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 PPP2R3CQ969Q6 453 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 AZIN2Q96A70 460 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 HAUS1Q96CS2 278 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 C7orf26Q96N11 449 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 CSRNP1Q96S65 589 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 ECSITQ9BQ95 431 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 NMUR2Q9GZQ4 415 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 WWP1Q9H0M0 922 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 FEM1BQ9UK73 627 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 ZNRF3Q9ULT6 936 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 LY75O60449 1722 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 CAPN14A8MX76 684 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 SPECC1L-ADORA2AF8WAN1 911 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 FKBP6O75344 327 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 TCF4P15884 667 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 PSMC4P43686 418 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 SPP2Q13103 211 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 BBS9Q3SYG4 887 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 ATG16L1Q676U5 607 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 IZUMO2Q6UXV1 221 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 MCF2L2Q86YR7 1114 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 MYLK4Q86YV6 388 aaPredicted RBP15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 NIPA2Q8N8Q9 360 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 ACER1Q8TDN7 264 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 SLC44A1Q8WWI5 657 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 NCSTNQ92542 709 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 PRR11Q96HE9 360 aaPredicted RBP15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 OLFM3Q96PB7 478 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 C12orf65Q9H3J6 166 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 ARHGEF4Q9NR80 690 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 TAGLN3Q9UI15 199 aa15.5■□□□□ 0.07
CACNA1A-220ENST00000635988 H3BRJ5 948 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 LSM8O95777 96 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 ZNF200P98182 395 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 KRT76Q01546 638 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 VPS72Q15906 364 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 ANKRD22Q5VYY1 191 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 PLA2G4FQ68DD2 849 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 ARHGAP22Q7Z5H3 698 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 ADGRG6Q86SQ4 1221 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 TTC7BQ86TV6 843 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 GINM1Q9NU53 330 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 AGTPBP1Q9UPW5 1226 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 F8VP50 259 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 FAM155BO75949 473 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 UBTFL6P0CB48 400 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 RTP1P59025 263 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 ZNF252P-AS1Q0IIN9 211 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 TMCO4Q5TGY1 634 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 WDR78Q5VTH9 848 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 TDRD10Q5VZ19 366 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 RDM1Q8NG50 284 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 APBB2Q92870 758 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 MCEEQ96PE7 176 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 C1orf21Q9H246 121 aa15.49■□□□□ 0.07
CACNA1A-220ENST00000635988 RGPD3A6NKT7 1758 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 RGPD4Q7Z3J3 1758 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 FAM237BA0A1B0GVD1 139 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 PDLIM1O00151 329 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 COPEO14579 308 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 RPL22P35268 128 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 OTUD4Q01804 1114 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 AAGABQ6PD74 315 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 KYAT3Q6YP21 454 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 RIPOR1Q6ZS17 1223 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 SH2D5Q6ZV89 423 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 RBM15BQ8NDT2 890 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 IL31RAQ8NI17 732 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 ACTL9Q8TC94 416 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 BSNDQ8WZ55 320 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 SPATA16Q9BXB7 569 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 ARMCX1Q9P291 453 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 XPO7Q9UIA9 1087 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 CCPG1Q9ULG6 757 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 POLRMTO00411 1230 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 ICAM1P05362 532 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 ENO1P06733 434 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 PYGBP11216 843 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 CDK7P50613 346 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 GAD2Q05329 585 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 SPOPLQ6IQ16 392 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 BBS12Q6ZW61 710 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 SDCCAG8Q86SQ7 713 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 ULK2Q8IYT8 1036 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 ST13P4Q8IZP2 240 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 ZNF606Q8WXB4 792 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 SERAC1Q96JX3 654 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 WDR83Q9BRX9 315 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 PCMTD2Q9NV79 361 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 PPARGC1AQ9UBK2 798 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 PLA2G4CQ9UP65 541 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 PPME1Q9Y570 386 aa15.48■□□□□ 0.07
CACNA1A-220ENST00000635988 TCRBV5S1A1TA0A578 114 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 KRT7P08729 469 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 ALDH1B1P30837 517 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 GHRHRQ02643 423 aa15.47■□□□□ 0.07
CACNA1A-220ENST00000635988 LIN52Q52LA3 116 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms