RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CTNNBL1Q8WYA6 563 aaPredicted RBP16.38■□□□□ 0.21
CLN8-209ENST00000635970 RUNDC3BQ96NL0 473 aa16.38■□□□□ 0.21
CLN8-209ENST00000635970 ZNF317Q96PQ6 595 aaPredicted RBP16.38■□□□□ 0.21
CLN8-209ENST00000635970 STK33Q9BYT3 514 aa16.38■□□□□ 0.21
CLN8-209ENST00000635970 PCIF1Q9H4Z3 704 aa16.38■□□□□ 0.21
CLN8-209ENST00000635970 ZNF576Q9H609 170 aa16.38■□□□□ 0.21
CLN8-209ENST00000635970 ZDHHC18Q9NUE0 388 aa16.38■□□□□ 0.21
CLN8-209ENST00000635970 TBC1D13Q9NVG8 400 aa16.38■□□□□ 0.21
CLN8-209ENST00000635970 GIT1Q9Y2X7 761 aa16.38■□□□□ 0.21
CLN8-209ENST00000635970 STYXL1Q9Y6J8 313 aa16.38■□□□□ 0.21
CLN8-209ENST00000635970 ATG2AQ2TAZ0 1938 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 GLRA4Q5JXX5 417 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 SLC35C1Q96A29 364 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 SAAL1Q96ER3 474 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 MKNK1Q9BUB5 465 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 CWH43Q9H720 699 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 GCNT4Q9P109 453 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 ATP8A1Q9Y2Q0 1164 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 EPOPA6NHQ4 379 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 MIF4GDA9UHW6 222 aaKnown RBP16.37■□□□□ 0.21
CLN8-209ENST00000635970 PTGESO14684 152 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 DDX3YO15523 660 aaKnown RBP16.37■□□□□ 0.21
CLN8-209ENST00000635970 NR3C1P04150 777 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 CXCL8P10145 99 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 RFX1P22670 979 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 SOX5P35711 763 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 ACOT2P49753 483 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 TCEAL1Q15170 157 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 ZNF280BQ86YH2 543 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 UBN1Q9NPG3 1134 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 HAUS2Q9NVX0 235 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 SAMD15Q9P1V8 674 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 AGO2Q9UKV8 859 aaKnown RBP16.37■□□□□ 0.21
CLN8-209ENST00000635970 TPX2Q9ULW0 747 aaKnown RBP16.37■□□□□ 0.21
CLN8-209ENST00000635970 CEP83Q9Y592 693 aa16.37■□□□□ 0.21
CLN8-209ENST00000635970 MYO9BQ13459 2157 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 CLIC2O15247 247 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 OGTO15294 1046 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 AKAP3O75969 853 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 DDHD2O94830 711 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 CHRNA3P32297 505 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 SLMAPQ14BN4 828 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 SPOUT1Q5T280 376 aaKnown RBP16.36■□□□□ 0.21
CLN8-209ENST00000635970 ZNF697Q5TEC3 545 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 RHOT2Q8IXI1 618 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 SLC35G2Q8TBE7 412 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 URGCPQ8TCY9 931 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 ARNTL2Q8WYA1 636 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 CLP1Q92989 425 aaKnown RBP16.36■□□□□ 0.21
CLN8-209ENST00000635970 RPS6KC1Q96S38 1066 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 MRPL9Q9BYD2 267 aaKnown RBP16.36■□□□□ 0.21
CLN8-209ENST00000635970 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 AGPAT3Q9NRZ7 376 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 CACNG4Q9UBN1 327 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 DNAJB4Q9UDY4 337 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 MTRF1LQ9UGC7 380 aaKnown RBP16.36■□□□□ 0.21
CLN8-209ENST00000635970 SLC12A4Q9UP95 1085 aa16.36■□□□□ 0.21
CLN8-209ENST00000635970 GOLGA8IPA6NC78 632 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 GOLGA8JA6NMD2 632 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 INPPL1O15357 1258 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 BUB1BO60566 1050 aaPredicted RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 ZC3H11AO75152 810 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLN8-209ENST00000635970 MMEP08473 750 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 CTNNB1P35222 781 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 PSMC2P35998 433 aaKnown RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 YARSP54577 528 aaKnown RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 RNASELQ05823 741 aaKnown RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 CRYMQ14894 314 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 DCAF17Q5H9S7 520 aaPredicted RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 SLFN12LQ6IEE8 588 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 TAOK1Q7L7X3 1001 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 SNX27Q96L92 541 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 ACAP3Q96P50 834 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 TGS1Q96RS0 853 aaKnown RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 DPH5Q9H2P9 285 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 ANKRD62A6NC57 917 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 RGS16O15492 202 aaPredicted RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 CHN1P15882 459 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 SLC10A6Q3KNW5 377 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 EPC2Q52LR7 807 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 TCERG1LQ5VWI1 586 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 GBP7Q8N8V2 638 aaPredicted RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 ZMAT2Q96NC0 199 aaKnown RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 PLCD4Q9BRC7 762 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 FAM213AQ9BRX8 229 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 ROPN1BQ9BZX4 212 aaPredicted RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 NRDE2Q9H7Z3 1164 aa16.35■□□□□ 0.21
CLN8-209ENST00000635970 ROPN1Q9HAT0 212 aaPredicted RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 TOPORSQ9NS56 1045 aaPredicted RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 CPSF3Q9UKF6 684 aaKnown RBP16.35■□□□□ 0.21
CLN8-209ENST00000635970 RFXAPO00287 272 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 GARTP22102 1010 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 ERVK-21P61565 698 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 ELF3P78545 371 aaPredicted RBP16.34■□□□□ 0.21
CLN8-209ENST00000635970 GRIN2CQ14957 1233 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 CEP57Q86XR8 500 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 TMEM130Q8N3G9 435 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 GDPD5Q8WTR4 605 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 ATXN2LQ8WWM7 1075 aaKnown RBP16.34■□□□□ 0.21
CLN8-209ENST00000635970 BORCS6Q96GS4 357 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms