RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PIGHQ14442 188 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ODF2Q5BJF6 829 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 LRRC38Q5VT99 294 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 DUPD1Q68J44 220 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 CCDC137Q6PK04 289 aaKnown RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ZNF771Q7L3S4 317 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ADAT2Q7Z6V5 191 aaKnown RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 IFNL1Q8IU54 200 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 TMEM192Q8IY95 271 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 CCDC105Q8IYK2 499 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 KATNAL2Q8IYT4 538 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 LILRB2Q8N423 598 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 PRELID2Q8N945 189 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 BEST2Q8NFU1 509 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 KIF12Q96FN5 646 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 RBM41Q96IZ5 413 aaKnown RBP7.55□□□□□ -1.2
BRCA1-230ENST00000634433 PPP1R16BQ96T49 567 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SH3GL2Q99962 352 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 SLX1AQ9BQ83 275 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 LRRC19Q9H756 370 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ZIM2Q9NZV7 527 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 RABL2BQ9UNT1 228 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 AGAP1Q9UPQ3 857 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 ZSWIM8A7E2V4 1837 aa7.55□□□□□ -1.2
BRCA1-230ENST00000634433 TMEM191CA6NGB0 347 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 ZSCAN5CA6NGD5 496 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 GOLGA6L10A6NI86 522 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 A6NNZ2 444 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 DAPK3O43293 454 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 XPOTO43592 962 aaKnown RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 GPR32O75388 356 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 CSDE1O75534 798 aaKnown RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 CFHP08603 1231 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 COL6A1P12109 1028 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 ATF7P17544 494 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 MARCKSL1P49006 195 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 COPS2P61201 443 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 CNGA2Q16280 664 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 KIZQ2M2Z5 673 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 TUBB8Q3ZCM7 444 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 SGO2Q562F6 1265 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 PRAMEF19Q5SWL8 479 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 TMC7Q7Z402 723 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 RCOR2Q8IZ40 523 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 IQCKQ8N0W5 287 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 C3orf20Q8ND61 904 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 EXD1Q8NHP7 514 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 LRRN4Q8WUT4 740 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 TMEM176AQ96HP8 235 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 PLEKHA4Q9H4M7 779 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 NEUROD4Q9HD90 331 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 SNTG2Q9NY99 539 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 VTI1BQ9UEU0 232 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 MTRF1LQ9UGC7 380 aaKnown RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 DCTN4Q9UJW0 460 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 BARX2Q9UMQ3 279 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 POLIQ9UNA4 740 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 AGPSO00116 658 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 HAS3O00219 553 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 CILPO75339 1184 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 NPTXRO95502 500 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 HMGCRP04035 888 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 MYL3P08590 195 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 FAM153BP0C7A2 387 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 RARAP10276 462 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 DARSP14868 501 aaKnown RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 SERPINB3P29508 390 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 PTGIRP43119 386 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 SSR1P43307 286 aaKnown RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 MAPK8P45983 427 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 RAD23BP54727 409 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 GSCP56915 257 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 SNX16P57768 344 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 PTPN11Q06124 597 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 ZNF268Q14587 947 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 FAM153CQ494X1 144 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 PHLDB2Q86SQ0 1253 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 TSEN2Q8NCE0 465 aaKnown RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 FAM76AQ8TAV0 307 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 IPCEF1Q8WWN9 437 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 KAT2BQ92831 832 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 SLCO2A1Q92959 643 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 FMO2Q99518 471 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 SMAD5Q99717 465 aaKnown RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 CELF4Q9BZC1 486 aaKnown RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 TRIM6Q9C030 488 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 FAM49AQ9H0Q0 323 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-230ENST00000634433 ERVK-5Q9HDB9 667 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 FAM153AQ9UHL3 310 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 TMCC3Q9ULS5 477 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 NR2E1Q9Y466 385 aa7.54□□□□□ -1.2
BRCA1-230ENST00000634433 C17orf102A2RUQ5 167 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 A6NJY4 79 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 SIGLEC16A6NMB1 481 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 TNPO2O14787 897 aaKnown RBP7.53□□□□□ -1.2
BRCA1-230ENST00000634433 CYP2B6P20813 491 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 LMNB2Q03252 620 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 INCA1Q0VD86 236 aa7.53□□□□□ -1.2
BRCA1-230ENST00000634433 ACAP1Q15027 740 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms