RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 RNF225M0QZC1 329 aaPredicted RBP19.83■□□□□ 0.77
PNKP-224ENST00000631020 CBFA2T2O43439 604 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 AVPR2P30518 371 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 MRE11P49959 708 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 ARPP19P56211 112 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 PSMC1P62191 440 aaKnown RBP19.83■□□□□ 0.77
PNKP-224ENST00000631020 ARHGAP44Q17R89 818 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 ZNF394Q53GI3 561 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 GET4Q7L5D6 327 aaPredicted RBP19.83■□□□□ 0.77
PNKP-224ENST00000631020 UNC93AQ86WB7 457 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 JAKMIP2Q96AA8 810 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 TRIM5Q9C035 493 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 GPR88Q9GZN0 384 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 CRTAC1Q9NQ79 661 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 AVENQ9NQS1 362 aaPredicted RBP19.83■□□□□ 0.77
PNKP-224ENST00000631020 TMLHEQ9NVH6 421 aa19.83■□□□□ 0.77
PNKP-224ENST00000631020 MYBPHLA2RUH7 354 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 CCL16O15467 120 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 PCSK1P29120 753 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
PNKP-224ENST00000631020 ELF1P32519 619 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 RAD23BP54727 409 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 POLR2FP61218 127 aaKnown RBP19.82■□□□□ 0.76
PNKP-224ENST00000631020 INTS6LQ5JSJ4 861 aaKnown RBP19.82■□□□□ 0.76
PNKP-224ENST00000631020 FAM171BQ6P995 826 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 ENOSF1Q7L5Y1 443 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 ACOT1Q86TX2 421 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 CRYBG2Q8N1P7 616 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 NEK11Q8NG66 645 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 SHC3Q92529 594 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 SYT15Q9BQS2 421 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 FAM124BQ9H5Z6 455 aaPredicted RBP19.82■□□□□ 0.76
PNKP-224ENST00000631020 GTF3C4Q9UKN8 822 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 CDH9Q9ULB4 789 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 CDH7Q9ULB5 785 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 CNTN6Q9UQ52 1028 aa19.82■□□□□ 0.76
PNKP-224ENST00000631020 FOXN3O00409 490 aaPredicted RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 VNN2O95498 520 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 PDGFBP01127 241 aaPredicted RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 PTPN1P18031 435 aaKnown RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 PTPN5P54829 565 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 HTR4Q13639 388 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 DRAP1Q14919 205 aaPredicted RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 TMEM270Q6UE05 265 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 RNF19BQ6ZMZ0 732 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 SLC44A3Q8N4M1 653 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 SLC4A11Q8NBS3 891 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 FAM81BQ96LP2 452 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 NT5C1AQ9BXI3 368 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 NLRC4Q9NPP4 1024 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 WNT16Q9UBV4 365 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 PCDHB4Q9Y5E5 795 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 TPM3P06753 285 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 PNMA6AP0CW24 399 aaPredicted RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 SRFP11831 508 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 CLCN5P51795 746 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 VCPP55072 806 aaKnown RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 YWHAEP62258 255 aaKnown RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 NHLH1Q02575 133 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 GPR17Q13304 367 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 RAPGEF1Q13905 1077 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 PABPC1LQ4VXU2 614 aaKnown RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 SLC39A12Q504Y0 691 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 IER5LQ5T953 404 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 TTC39CQ8N584 583 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 FGF13Q92913 245 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 STK33Q9BYT3 514 aa19.81■□□□□ 0.76
PNKP-224ENST00000631020 DNMT3BQ9UBC3 853 aaKnown RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 AFF4Q9UHB7 1163 aaKnown RBP19.81■□□□□ 0.76
PNKP-224ENST00000631020 PRRG1O14668 218 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 CALCAP01258 141 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 LRG1P02750 347 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 CPB1P15086 417 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 RFX1P22670 979 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 ZNF75DP51815 510 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 ZNF132P52740 706 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 TSPY1Q01534 308 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 C12orf29Q8N999 325 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 B3GALNT2Q8NCR0 500 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 PRSS33Q8NF86 280 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 TMEM176AQ96HP8 235 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 PGLYRP2Q96PD5 576 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 TTYH3Q9C0H2 523 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 IRF2BPLQ9H1B7 796 aa19.8■□□□□ 0.76
PNKP-224ENST00000631020 CACNA1HO95180 2353 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 KRT5P13647 590 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 TRIM21P19474 475 aaKnown RBP19.79■□□□□ 0.76
PNKP-224ENST00000631020 JAM2P57087 298 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 NTHL1P78549 312 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 MDH1BQ5I0G3 518 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 ASTLQ6HA08 431 aaPredicted RBP19.79■□□□□ 0.76
PNKP-224ENST00000631020 MTSS1LQ765P7 747 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 VSTM4Q8IW00 320 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 FAM71AQ8IYT1 594 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 DCP1BQ8IZD4 617 aaKnown RBP19.79■□□□□ 0.76
PNKP-224ENST00000631020 ATAD1Q8NBU5 361 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 RBBP8NLQ8NC74 664 aaPredicted RBP19.79■□□□□ 0.76
PNKP-224ENST00000631020 MYCBPAPQ8TBZ2 947 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 RSAD2Q8WXG1 361 aa19.79■□□□□ 0.76
PNKP-224ENST00000631020 TNIP3Q96KP6 325 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms