RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 DEPTORQ8TB45 409 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 MZB1Q8WU39 189 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ZNF296Q8WUU4 475 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 TCP11Q8WWU5 503 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 USP6NLQ92738 828 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 GPR20Q99678 358 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 MRPL4Q9BYD3 311 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 PCDH9Q9HC56 1237 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 NRBP2Q9NSY0 501 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 FKTNO75072 461 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ATF7P17544 494 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 CETN2P41208 172 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 SKIV2L2P42285 1042 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ARSEP51690 589 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 VCPP55072 806 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 RPL7AP62424 266 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 MOGSQ13724 837 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ARHGEF6Q15052 776 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 LONRF1Q17RB8 773 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 FAM133BQ5BKY9 247 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 TFDP3Q5H9I0 405 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 CCDC62Q6P9F0 684 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ASRGL1Q7L266 308 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 GDAP1Q8TB36 358 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ARHGEF2Q92974 986 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 MMP19Q99542 508 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 C11orf70Q9BRQ4 267 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 TACO1Q9BSH4 297 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 C2orf40Q9H1Z8 148 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 KLC4Q9NSK0 619 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 KLHL11Q9NVR0 708 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 HAUS2Q9NVX0 235 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 MRPL42Q9Y6G3 142 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 TMEM120BA0PK00 339 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 SIGLEC16A6NMB1 481 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 SMAPO00193 183 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 TJP3O95049 919 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 IFNB1P01574 187 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 NEFHP12036 1026 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 CCNB1P14635 433 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 TCF4P15884 667 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 SLC26A2P50443 739 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 FCGRTP55899 365 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 FNDC1Q4ZHG4 1894 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ZNF394Q53GI3 561 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 DAB2IPQ5VWQ8 1189 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 IZUMO3Q5VZ72 239 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 TRABD2AQ86V40 505 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ANKLE1Q8NAG6 615 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 PRCCQ92733 491 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 CYLDQ9NQC7 956 aa7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 FBXO9Q9UK97 447 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ARIH1Q9Y4X5 557 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-244ENST00000627109 ASMTLO95671 621 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 TNFSF9P41273 254 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 TM4SF4P48230 202 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 CNTN2Q02246 1040 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 BNIP1Q12981 228 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 RPAINQ86UA6 219 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 SEPT1Q8WYJ6 367 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 TFAP2BQ92481 460 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 GRAMD1AQ96CP6 724 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 HHIPL1Q96JK4 782 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 NSRP1Q9H0G5 558 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 CISHQ9NSE2 258 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 BAIAP2L1Q9UHR4 511 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 STRIP2Q9ULQ0 834 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 NAALADL1Q9UQQ1 740 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 MCM3APO60318 1980 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 CFAP73A6NFT4 308 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 ZNF487B1APH4 448 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 TYROBPO43914 113 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 CAPN15O75808 1086 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 ELNP15502 786 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 CALRP27797 417 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 HOXD10P28358 340 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 FLT3LGP49771 235 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 STAT5BP51692 787 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 LAMTOR4Q0VGL1 99 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 E2F5Q15329 346 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 MTFR1Q15390 333 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 SEPT7Q16181 437 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 KYNUQ16719 465 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 EFHC2Q5JST6 749 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 MPZL3Q6UWV2 235 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 MFSD7Q6UXD7 560 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 SEPT14Q6ZU15 432 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 BBS12Q6ZW61 710 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 CYP4V2Q6ZWL3 525 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 TRPM8Q7Z2W7 1104 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 PLEKHH3Q7Z736 793 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 ZNF276Q8N554 614 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 GLIS1Q8NBF1 620 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 HAUS1Q96CS2 278 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 MCRS1Q96EZ8 462 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 THOC1Q96FV9 657 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 SMAD5Q99717 465 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 YY1AP1Q9H869 796 aa7.53□□□□□ -1.2
CTNNA1-244ENST00000627109 SENP1Q9P0U3 644 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms