RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 SMARCD1Q96GM5 515 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 FAXDC2Q96IV6 333 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 PKMYT1Q99640 499 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 RPP25Q9BUL9 199 aaKnown RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 NIF3L1Q9GZT8 377 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 SMYD3Q9H7B4 428 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 CRTAC1Q9NQ79 661 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 TRPM5Q9NZQ8 1165 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ZNF638Q14966 1978 aaKnown RBP13.12□□□□□ -0.31
CBWD3-218ENST00000622755 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 TRAV19A0A0A6YYK7 116 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 KANSL1LA0AUZ9 987 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 CHADO15335 359 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-218ENST00000622755 MOSPD3O75425 235 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 RTN3O95197 1032 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-218ENST00000622755 VNN1O95497 513 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 CKMP06732 381 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 USP17L7P0C7H9 530 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 WEE1P30291 646 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 PLA2G5P39877 138 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 MAGEA9P43362 315 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 KPNA1P52294 538 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-218ENST00000622755 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
CBWD3-218ENST00000622755 STARD6P59095 220 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 AMPD2Q01433 879 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 UBXN2BQ14CS0 331 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 VITQ6UXI7 678 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 TPRG1Q6ZUI0 275 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 CMTM8Q8IZV2 173 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 STKLD1Q8NE28 680 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 PDZD8Q8NEN9 1154 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 BPIFB1Q8TDL5 484 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 C8orf48Q96LL4 319 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 MYRFLQ96LU7 910 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 NT5C1AQ9BXI3 368 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 BCO2Q9BYV7 579 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 GZF1Q9H116 711 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-218ENST00000622755 FAM124BQ9H5Z6 455 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-218ENST00000622755 TRPC7Q9HCX4 862 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 TRPV5Q9NQA5 729 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 RAB20Q9NX57 234 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
CBWD3-218ENST00000622755 KRBA1A5PL33 1030 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 BIN1O00499 593 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
CBWD3-218ENST00000622755 HCRTO43612 131 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 GLULP15104 373 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 PFKLP17858 780 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 FCARP24071 287 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 VIPR2P41587 438 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 GPR15P49685 360 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 CDH8P55286 799 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 SLC8A3P57103 927 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 PAK1Q13153 545 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
CBWD3-218ENST00000622755 SDHAF4Q5VUM1 108 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 SCARA3Q6AZY7 606 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 FOXR2Q6PJQ5 311 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 FILIP1Q7Z7B0 1213 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 MON1AQ86VX9 555 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 NELFBQ8WX92 580 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 PLA2G2FQ9BZM2 168 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
CBWD3-218ENST00000622755 TDP1Q9NUW8 608 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 DACH1Q9UI36 760 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
CBWD3-218ENST00000622755 F8VP50 259 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 ABL1P00519 1130 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 F11P03951 625 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 CCDC192P0DO97 292 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 HMGA1P17096 107 aaKnown RBP13.1□□□□□ -0.31
CBWD3-218ENST00000622755 NDST1P52848 882 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
CBWD3-218ENST00000622755 MORC3Q14149 939 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 STXBP5Q5T5C0 1151 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 CWF19L1Q69YN2 538 aaKnown RBP13.1□□□□□ -0.31
CBWD3-218ENST00000622755 ACOT1Q86TX2 421 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 NUP93Q8N1F7 819 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 TMEM105Q8N8V8 129 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 PJA1Q8NG27 643 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 TAS1R2Q8TE23 839 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 DPEP3Q9H4B8 488 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 C8orf33Q9H7E9 229 aaPredicted RBP13.1□□□□□ -0.31
CBWD3-218ENST00000622755 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 HEBP1Q9NRV9 189 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms