RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 FGFR1OPO95684 399 aaKnown RBP22.53■■□□□ 1.2
PMPCA-212ENST00000622209 LHX1P48742 406 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 TUFMP49411 452 aaKnown RBP22.53■■□□□ 1.2
PMPCA-212ENST00000622209 STX17P56962 302 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 NLRP12P59046 1061 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 PPP3CAQ08209 521 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 SOWAHAQ2M3V2 549 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 SGSM1Q2NKQ1 1148 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 WDR72Q3MJ13 1102 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 GPR158Q5T848 1215 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 RBM43Q6ZSC3 357 aaKnown RBP22.53■■□□□ 1.2
PMPCA-212ENST00000622209 LRRTM3Q86VH5 581 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 TTC8Q8TAM2 541 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 GIPC2Q8TF65 315 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 TAF4BQ92750 862 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 LRRC3BQ96PB8 259 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 TMEM8AQ9HCN3 771 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 DACH1Q9UI36 760 aa22.53■■□□□ 1.2
PMPCA-212ENST00000622209 GPR179Q6PRD1 2367 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 ARNTLO00327 626 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 DPYSL4O14531 572 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 GABRDO14764 452 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 GNA14O95837 355 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 SOX9P48436 509 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 GCLMP48507 274 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 KPNA1P52294 538 aaPredicted RBP22.52■■□□□ 1.2
PMPCA-212ENST00000622209 TNNC1P63316 161 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 CYP4F8P98187 520 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 MYL7Q01449 175 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 SMARCB1Q12824 385 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 VEPH1Q14D04 833 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 ARHGAP15Q53QZ3 475 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 ADGRF2Q8IZF7 708 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 ZBTB44Q8NCP5 570 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 MMS19Q96T76 1030 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 ACBD6Q9BR61 282 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 CHRDQ9H2X0 955 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 PRMT8Q9NR22 394 aaPredicted RBP22.52■■□□□ 1.2
PMPCA-212ENST00000622209 HSFX1Q9UBD0 423 aa22.52■■□□□ 1.2
PMPCA-212ENST00000622209 SLC38A8A6NNN8 435 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 CHADO15335 359 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 TACC1O75410 805 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 FGF19O95750 216 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 ATF6P18850 670 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 FOXK2Q01167 660 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 TAF12Q16514 161 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 ZNF699Q32M78 642 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 CT47A1Q5JQC4 288 aaPredicted RBP22.51■■□□□ 1.19
PMPCA-212ENST00000622209 KRT39Q6A163 491 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 DCP1BQ8IZD4 617 aaKnown RBP22.51■■□□□ 1.19
PMPCA-212ENST00000622209 RMDN1Q96DB5 314 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 ZFYVE19Q96K21 471 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 DDX43Q9NXZ2 648 aaKnown RBP22.51■■□□□ 1.19
PMPCA-212ENST00000622209 ABI2Q9NYB9 513 aaPredicted RBP22.51■■□□□ 1.19
PMPCA-212ENST00000622209 TSC2P49815 1807 aa22.51■■□□□ 1.19
PMPCA-212ENST00000622209 DMXL1Q9Y485 3027 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 HLA-DRAP01903 254 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 P4HA1P13674 534 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 WARSP23381 471 aaKnown RBP22.5■■□□□ 1.19
PMPCA-212ENST00000622209 PIK3CAP42336 1068 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 TSPY1Q01534 308 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 FCHO2Q0JRZ9 810 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 CCDC40Q4G0X9 1142 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 ZNF667Q5HYK9 610 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 CCDC183Q5T5S1 534 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 NELL1Q92832 810 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 SRRTQ9BXP5 876 aaKnown RBP22.5■■□□□ 1.19
PMPCA-212ENST00000622209 NCDNQ9UBB6 729 aa22.5■■□□□ 1.19
PMPCA-212ENST00000622209 NXF1Q9UBU9 619 aaKnown RBP22.5■■□□□ 1.19
PMPCA-212ENST00000622209 DCHS1Q96JQ0 3298 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 HAPLN1P10915 354 aaPredicted RBP22.49■■□□□ 1.19
PMPCA-212ENST00000622209 CHRNB1P11230 501 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 ERCC5P28715 1186 aaPredicted RBP22.49■■□□□ 1.19
PMPCA-212ENST00000622209 PCSK1P29120 753 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 DPCR1Q3MIW9 517 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 DCAF17Q5H9S7 520 aaPredicted RBP22.49■■□□□ 1.19
PMPCA-212ENST00000622209 TCERG1LQ5VWI1 586 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 OSTM1Q86WC4 334 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 C2orf15Q8WU43 125 aaKnown RBP22.49■■□□□ 1.19
PMPCA-212ENST00000622209 KBTBD7Q8WVZ9 684 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 GCNAQ96QF7 691 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 SMG9Q9H0W8 520 aaKnown RBP22.49■■□□□ 1.19
PMPCA-212ENST00000622209 TASP1Q9H6P5 420 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 MMRN2Q9H8L6 949 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 IL21Q9HBE4 155 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 RBM12Q9NTZ6 932 aaKnown RBP22.49■■□□□ 1.19
PMPCA-212ENST00000622209 TMLHEQ9NVH6 421 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 F5P12259 2224 aa22.49■■□□□ 1.19
PMPCA-212ENST00000622209 LILRB5O75023 590 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 PRAMEF12O95522 483 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 ASS1P00966 412 aaKnown RBP22.48■■□□□ 1.19
PMPCA-212ENST00000622209 MXI1P50539 228 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 MARSP56192 900 aaKnown RBP22.48■■□□□ 1.19
PMPCA-212ENST00000622209 ERMP1Q7Z2K6 904 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 CCDC150Q8NCX0 1101 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 SPPL2BQ8TCT7 592 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 TAS1R2Q8TE23 839 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 SLC35C1Q96A29 364 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 MED15Q96RN5 788 aa22.48■■□□□ 1.19
PMPCA-212ENST00000622209 SLC46A2Q9BY10 475 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms