RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	GAS2	O43903	313 aa	Known RBP	11.76	□□□□□ -0.53
TP53-223	ENST00000618944	GRAP2	O75791	330 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	VTN	P04004	478 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	KRT7	P08729	469 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	MIP	P30301	263 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	HIF1A	Q16665	826 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	MAP1S	Q66K74	1059 aa	Predicted RBP	11.76	□□□□□ -0.53
TP53-223	ENST00000618944	CCDC62	Q6P9F0	684 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	PPP1R21	Q6ZMI0	780 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	CEP128	Q6ZU80	1094 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.76	□□□□□ -0.53
TP53-223	ENST00000618944	CEP57	Q86XR8	500 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	FITM2	Q8N6M3	262 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	PYROXD1	Q8WU10	500 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	CPT1B	Q92523	772 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	TMEM176A	Q96HP8	235 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	TTC25	Q96NG3	672 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	IFT122	Q9HBG6	1241 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	GRID1	Q9ULK0	1009 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	TNFSF13B	Q9Y275	285 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	ARL2BP	Q9Y2Y0	163 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	HBP1	O60381	514 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	INSRR	P14616	1297 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	PTPN7	P35236	360 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	KCNJ2	P63252	427 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	PTPN11	Q06124	597 aa	Predicted RBP	11.76	□□□□□ -0.53
TP53-223	ENST00000618944	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.76	□□□□□ -0.53
TP53-223	ENST00000618944	C3orf62	Q6ZUJ4	267 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	KIF2B	Q8N4N8	673 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	SMC6	Q96SB8	1091 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	MPHOSPH6	Q99547	160 aa	Known RBP	11.76	□□□□□ -0.53
TP53-223	ENST00000618944	SLCO1B3	Q9NPD5	702 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	BAIAP2L1	Q9UHR4	511 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	AKT3	Q9Y243	479 aa		11.76	□□□□□ -0.53
TP53-223	ENST00000618944	CHUK	O15111	745 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	SLC25A27	O95847	323 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	GSTA1	P08263	222 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	EIF3E	P60228	445 aa	Known RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	MGAT5	Q09328	741 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	CDO1	Q16878	200 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	CCDC142	Q17RM4	750 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	POLN	Q7Z5Q5	900 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	ZC3H18	Q86VM9	953 aa	Known RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	EXOC8	Q8IYI6	725 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	ADPGK	Q9BRR6	497 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	BCO2	Q9BYV7	579 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	PRKAG3	Q9UGI9	489 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	USP18	Q9UMW8	372 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	TRIM33	Q9UPN9	1127 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	ACTL7B	Q9Y614	415 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	CLUH	O75153	1309 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	GOLGA8R	I6L899	631 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	RNF8	O76064	485 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	IL18RAP	O95256	599 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	ASMTL	O95671	621 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	KRT4	P19013	534 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	CA4	P22748	312 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	IREB2	P48200	963 aa	Known RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	BASP1	P80723	227 aa	Known RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	E2F5	Q15329	346 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	SLC1A5	Q15758	541 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	SLC10A6	Q3KNW5	377 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	BBS9	Q3SYG4	887 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	BBS12	Q6ZW61	710 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	PPIL6	Q8IXY8	311 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	RIBC1	Q8N443	379 aa	Predicted RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	C12orf29	Q8N999	325 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	LRRN4	Q8WUT4	740 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	HPDL	Q96IR7	371 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	KLF6	Q99612	283 aa	Predicted RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	MAK16	Q9BXY0	300 aa	Known RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	C12orf65	Q9H3J6	166 aa	Known RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	KLHL14	Q9P2G3	628 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	XPO7	Q9UIA9	1087 aa	Known RBP	11.75	□□□□□ -0.53
TP53-223	ENST00000618944	RABGEF1	Q9UJ41	708 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	PPME1	Q9Y570	386 aa		11.75	□□□□□ -0.53
TP53-223	ENST00000618944	WDR91	A4D1P6	747 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	MGRN1	O60291	552 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	CILP	O75339	1184 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	C22orf31	O95567	290 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	TRUB2	O95900	331 aa	Known RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	RDX	P35241	583 aa	Known RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	GPD2	P43304	727 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	RGS7	P49802	495 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	NDST1	P52848	882 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	NCALD	P61601	193 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	ZNF268	Q14587	947 aa	Predicted RBP	11.74	□□□□□ -0.53
TP53-223	ENST00000618944	MTFR1	Q15390	333 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	GALNTL6	Q49A17	601 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	OR6B2	Q6IFH4	312 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	C1orf228	Q6PIY5	440 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	ECHDC2	Q86YB7	292 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	PALM2	Q8IXS6	379 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	NAT8L	Q8N9F0	302 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	FBXO36	Q8NEA4	188 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	SPATA18	Q8TC71	538 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	DENND1A	Q8TEH3	1009 aa		11.74	□□□□□ -0.53
TP53-223	ENST00000618944	FBF1	Q8TES7	1133 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms