RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ASCC3Q8N3C0 2202 aaKnown RBP18.94■□□□□ 0.62
TRAPPC3-209ENST00000616395 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 SLC26A4O43511 780 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 CXCL8P10145 99 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 TYMPP19971 482 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 PTGER3P43115 390 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 TPM4P67936 248 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 SLC39A12Q504Y0 691 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 KRT79Q5XKE5 535 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 TXNDC8Q6A555 127 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 LPCAT2Q7L5N7 544 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 TMEFF1Q8IYR6 380 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 RLN3Q8WXF3 142 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 CDK5RAP3Q96JB5 506 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 PNMA5Q96PV4 448 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 MAGEF1Q9HAY2 307 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 ANKFY1Q9P2R3 1169 aa18.93■□□□□ 0.62
TRAPPC3-209ENST00000616395 FLNBO75369 2602 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 CITO14578 2027 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 ANTXRLA6NF34 631 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 TNFRSF10BO14763 440 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 GUCY2FP51841 1108 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 NLRP12P59046 1061 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 ZBTB6Q15916 424 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 C2orf27AQ580R0 203 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 TTC30AQ86WT1 665 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 GAS2L3Q86XJ1 694 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 SYT12Q8IV01 421 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 USP33Q8TEY7 942 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 CCDC47Q96A33 483 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 KMT5AQ9NQR1 393 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 KIAA1549LQ6ZVL6 1849 aa18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 ATXN2Q99700 1313 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-209ENST00000616395 GOLGA6L19H0YKK7 550 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 PPEF2O14830 753 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 F11P03951 625 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 SLFN14P0C7P3 912 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 SEC13P55735 322 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 DMP1Q13316 513 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 MTF1Q14872 753 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 NOLC1Q14978 699 aaKnown RBP eCLIP18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 ZNF423Q2M1K9 1284 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 RRAGBQ5VZM2 374 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 SLC23A3Q6PIS1 610 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 DAW1Q8N136 415 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 HDDC3Q8N4P3 179 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 CCDC33Q8N5R6 958 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 FRMD1Q8N878 549 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 TTC16Q8NEE8 873 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 OLIG1Q8TAK6 271 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 HNRNPLLQ8WVV9 542 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 FNBP1Q96RU3 617 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 GTPBP2Q9BX10 602 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 GTPBP4Q9BZE4 634 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 LRRC27Q9C0I9 530 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 DUS2Q9NX74 493 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 UBQLN1Q9UMX0 589 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 WNT6Q9Y6F9 365 aa18.91■□□□□ 0.62
TRAPPC3-209ENST00000616395 MYO16Q9Y6X6 1858 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 MAP3K13O43283 966 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 TOM1L1O75674 476 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 CFIP05156 583 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 MYL1P05976 194 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 ODC1P11926 461 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 HMGA1P17096 107 aaKnown RBP18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 DDX6P26196 483 aaKnown RBP eCLIP18.9■□□□□ 0.621e-33■■■□□ 17.3
TRAPPC3-209ENST00000616395 P2RY2P41231 377 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 STAT6P42226 847 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 ATXN3P54252 364 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 AMPD3Q01432 767 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 POSTNQ15063 836 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 MON1AQ86VX9 555 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 PDILTQ8N807 584 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 TRIML1Q8N9V2 468 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 LRRC15Q8TF66 581 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 OSCP1Q8WVF1 389 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 SMARCE1Q969G3 411 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 DHX58Q96C10 678 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 SENP8Q96LD8 212 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 RUSC1Q9BVN2 902 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 CCSER1Q9C0I3 900 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 ZCWPW1Q9H0M4 648 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 CCDC86Q9H6F5 360 aaKnown RBP18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 PLEKHA5Q9HAU0 1116 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 CACNA1EQ15878 2313 aa18.9■□□□□ 0.62
TRAPPC3-209ENST00000616395 MYH11P35749 1972 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 TTC26A0AVF1 554 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 EIF4E1BA6NMX2 242 aaKnown RBP18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 K7EQS6 105 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 SLC16A4O15374 487 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 HIP1RO75146 1068 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 HNRNPLP14866 589 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 CYP3A5P20815 502 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 MUTP22033 750 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 LILRA4P59901 499 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 ZNF268Q14587 947 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 CRY1Q16526 586 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 CCDC26Q8TAB7 109 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 ATP2A3Q93084 1043 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 LRIG1Q96JA1 1093 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms