RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 A8MUI8 341 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 B4GALT4O60513 344 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 CTSHP09668 335 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 TMEM253P0C7T8 217 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 FGFR4P22455 802 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 MRPS6P82932 125 aaKnown RBP13.76□□□□□ -0.21
FOXN3-219ENST00000615335 PTK7Q13308 1070 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 CEP128Q6ZU80 1094 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 HOOK3Q86VS8 718 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 SLC9A9Q8IVB4 645 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 XXYLT1Q8NBI6 393 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 SLC35G2Q8TBE7 412 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 RFFLQ8WZ73 363 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 ZBTB45Q96K62 511 aaPredicted RBP13.76□□□□□ -0.21
FOXN3-219ENST00000615335 ELAC2Q9BQ52 826 aaKnown RBP13.76□□□□□ -0.21
FOXN3-219ENST00000615335 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
FOXN3-219ENST00000615335 LRCH1Q9Y2L9 728 aa13.76□□□□□ -0.21
FOXN3-219ENST00000615335 CLDN3O15551 220 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 DAPK3O43293 454 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 TPD52L2O43399 206 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 PFDN1O60925 122 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 ZNF189O75820 626 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 PIGRP01833 764 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 DARSP14868 501 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 PDE6CP51160 858 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 CRYBB1P53674 252 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 PARP6Q2NL67 630 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 KRT71Q3SY84 523 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 SLFN12LQ6IEE8 588 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 C12orf56Q8IXR9 622 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 ENDOVQ8N8Q3 282 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 OR2W6PQ8NHA6 318 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 UBLCP1Q8WVY7 318 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 CTNNBL1Q8WYA6 563 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 FAM136AQ96C01 138 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 ACO2Q99798 780 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 MCOLN1Q9GZU1 580 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 OSGEPQ9NPF4 335 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 DMAC2Q9NW81 257 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 PAIP2BQ9ULR5 123 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 GOLGA8IPA6NC78 632 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 GOLGA8JA6NMD2 632 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 TTI1O43156 1089 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 SUN1O94901 812 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 LMNAP02545 664 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 RPLP2P05387 115 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 ZFXP17010 805 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 GARTP22102 1010 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 MYBPC2Q14324 1141 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 SNX17Q15036 470 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 FAM187BQ17R55 369 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 ATF7IP2Q5U623 682 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 CCDC80Q76M96 950 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 LRRC34Q8IZ02 419 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 STKLD1Q8NE28 680 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 OLIG1Q8TAK6 271 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 TMEM40Q8WWA1 233 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 MIS12Q9H081 205 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 INTS2Q9H0H0 1204 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 FAM114A2Q9NRY5 505 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 ITGB1BP2Q9UKP3 347 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 TTC7AQ9ULT0 858 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 UTP11Q9Y3A2 253 aaKnown RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 USP15Q9Y4E8 981 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-219ENST00000615335 CDY2AQ9Y6F7 541 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 COMMD3-BMI1R4GMX3 469 aa13.75□□□□□ -0.21
FOXN3-219ENST00000615335 TOM1L1O75674 476 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 HARSP12081 509 aaKnown RBP13.74□□□□□ -0.21
FOXN3-219ENST00000615335 ABCB4P21439 1286 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 TNFAIP3P21580 790 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 FLT3P36888 993 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 AMHR2Q16671 573 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CCDC92Q53HC0 331 aaPredicted RBP13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CATSPER4Q7RTX7 472 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 ZBTB33Q86T24 672 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CDR2LQ86X02 465 aaPredicted RBP13.74□□□□□ -0.21
FOXN3-219ENST00000615335 ZBTB8BQ8NAP8 495 aaPredicted RBP13.74□□□□□ -0.21
FOXN3-219ENST00000615335 ZSWIM2Q8NEG5 633 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 TMEM174Q8WUU8 243 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 ATXN2LQ8WWM7 1075 aaKnown RBP13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CPB2Q96IY4 423 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 SEZ6LQ9BYH1 1024 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 TRPV2Q9Y5S1 764 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 MAGEA13PA6NCF6 341 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 SNX3O60493 162 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 OAS1P00973 400 aaKnown RBP13.74□□□□□ -0.21
FOXN3-219ENST00000615335 FGGP02679 453 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 TRIM49P0CI25 452 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 TRIM49CP0CI26 452 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 TPBGLP0DKB5 382 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 SKIP12755 728 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CCNB1P14635 433 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CHN1P15882 459 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
FOXN3-219ENST00000615335 CDK7P50613 346 aa13.74□□□□□ -0.21
FOXN3-219ENST00000615335 MYL7Q01449 175 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms