RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CSH1P0DML2 217 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 CSH2P0DML3 217 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 VIPR2P41587 438 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 USP46P62068 366 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 KCNH2Q12809 1159 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 ZNF394Q53GI3 561 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 RBM43Q6ZSC3 357 aaKnown RBP17.79■□□□□ 0.44
CBWD3-211ENST00000615061 MTSS1LQ765P7 747 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 FAM35AQ86V20 835 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 UNC93AQ86WB7 457 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 FUKQ8N0W3 1084 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 CRYBG2Q8N1P7 616 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 ZSCAN18Q8TBC5 510 aaPredicted RBP17.79■□□□□ 0.44
CBWD3-211ENST00000615061 NXPE3Q969Y0 559 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 CNOT6LQ96LI5 555 aaKnown RBP17.79■□□□□ 0.44
CBWD3-211ENST00000615061 ELOVL4Q9GZR5 314 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 NUP210Q8TEM1 1887 aaPredicted RBP17.79■□□□□ 0.44
CBWD3-211ENST00000615061 CILPO75339 1184 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 TADA3O75528 432 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 NOL4O94818 638 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 F11P03951 625 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 CFHP08603 1231 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 GPR158Q5T848 1215 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 KCNK16Q96T55 309 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 MED10Q9BTT4 135 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 CISHQ9NSE2 258 aa17.79■□□□□ 0.44
CBWD3-211ENST00000615061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.79■□□□□ 0.44
CBWD3-211ENST00000615061 PRR33A8MZF0 331 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 GPC5P78333 572 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 HSP90AA4PQ58FG1 418 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 IER5LQ5T953 404 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 SLC2A14Q8TDB8 520 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 SMARCD2Q92925 531 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 RSPRY1Q96DX4 576 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 NT5C1AQ9BXI3 368 aa17.78■□□□□ 0.44
CBWD3-211ENST00000615061 BEST1O76090 585 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 FGFR1OPO95684 399 aaKnown RBP17.77■□□□□ 0.44
CBWD3-211ENST00000615061 MBD3O95983 291 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 SRFP11831 508 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 ANXA13P27216 316 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 CDC25CP30307 473 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 LMO3Q8TAP4 145 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 TRMT2BQ96GJ1 504 aaKnown RBP17.77■□□□□ 0.44
CBWD3-211ENST00000615061 SPATA17Q96L03 361 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 C8orf48Q96LL4 319 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 MYRFLQ96LU7 910 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 SMG9Q9H0W8 520 aaKnown RBP17.77■□□□□ 0.44
CBWD3-211ENST00000615061 ZFP14Q9HCL3 533 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 KRT82Q9NSB4 513 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 COL4A3Q01955 1670 aa17.77■□□□□ 0.44
CBWD3-211ENST00000615061 TRIM66O15016 1216 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 ECI2O75521 394 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 FGF19O95750 216 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 AFPP02771 609 aaKnown RBP17.76■□□□□ 0.43
CBWD3-211ENST00000615061 ADORA2BP29275 332 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 CUL2Q13617 745 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 GRM2Q14416 872 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 TPD52L1Q16890 204 aaPredicted RBP17.76■□□□□ 0.43
CBWD3-211ENST00000615061 TXNDC8Q6A555 127 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 DENND5BQ6ZUT9 1274 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 ARID3BQ8IVW6 561 aaPredicted RBP17.76■□□□□ 0.43
CBWD3-211ENST00000615061 KAT5Q92993 513 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 PBXIP1Q96AQ6 731 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 ELSPBP1Q96BH3 223 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 GCNAQ96QF7 691 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 SLC46A2Q9BY10 475 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 TMEM63CQ9P1W3 806 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 CACNA1HO95180 2353 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 PMM2O15305 246 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 AP1G2O75843 785 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 PRAMEF12O95522 483 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 ERCC5P28715 1186 aaPredicted RBP17.76■□□□□ 0.43
CBWD3-211ENST00000615061 IFRD2Q12894 506 aaPredicted RBP17.76■□□□□ 0.43
CBWD3-211ENST00000615061 ARHGAP15Q53QZ3 475 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 MAB21L3Q8N8X9 362 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 ZMIZ2Q8NF64 920 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 SMARCD1Q96GM5 515 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 SMOQ99835 787 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 GPR88Q9GZN0 384 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 TASP1Q9H6P5 420 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 DACH1Q9UI36 760 aa17.76■□□□□ 0.43
CBWD3-211ENST00000615061 RAD23BP54727 409 aa17.75■□□□□ 0.43
CBWD3-211ENST00000615061 VITQ6UXI7 678 aa17.75■□□□□ 0.43
CBWD3-211ENST00000615061 CYFIP2Q96F07 1278 aa17.75■□□□□ 0.43
CBWD3-211ENST00000615061 FAXDC2Q96IV6 333 aa17.75■□□□□ 0.43
CBWD3-211ENST00000615061 LRRC3BQ96PB8 259 aa17.75■□□□□ 0.43
CBWD3-211ENST00000615061 UXTQ9UBK9 157 aaPredicted RBP17.75■□□□□ 0.43
CBWD3-211ENST00000615061 FBXL21Q9UKT6 434 aa17.75■□□□□ 0.43
CBWD3-211ENST00000615061 CA14Q9ULX7 337 aa17.75■□□□□ 0.43
CBWD3-211ENST00000615061 PATJQ8NI35 1801 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 KRBA1A5PL33 1030 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 HEPACAM2A8MVW5 462 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 P4HA2O15460 535 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 MAP3K7CLP57077 242 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 CCDC183Q5T5S1 534 aa17.74■□□□□ 0.43
CBWD3-211ENST00000615061 PPP1R26Q5T8A7 1209 aaPredicted RBP17.74■□□□□ 0.43
CBWD3-211ENST00000615061 C11orf57Q6ZUT1 292 aaPredicted RBP17.74■□□□□ 0.43
CBWD3-211ENST00000615061 ARHGEF19Q8IW93 802 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms