RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 PTH2RP49190 550 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 PDE6CP51160 858 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 SUMO3P55854 103 aaPredicted RBP6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 RHDQ02161 417 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 KRT17Q04695 432 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 CNGA2Q16280 664 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 KIAA0753Q2KHM9 967 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 AKNAD1Q5T1N1 836 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 PPP4R4Q6NUP7 873 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 MAVSQ7Z434 540 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 DGKHQ86XP1 1220 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 MPP5Q8N3R9 675 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 APIPQ96GX9 242 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 ZNF764Q96H86 408 aaPredicted RBP6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 BHMT2Q9H2M3 363 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 CXorf36Q9H7Y0 433 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 ZSCAN32Q9NX65 697 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 STK32BQ9NY57 414 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 ARPP21Q9UBL0 812 aaPredicted RBP6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 DKK3Q9UBP4 350 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 AFF4Q9UHB7 1163 aaKnown RBP6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 CSF1RP07333 972 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 PDHA1P08559 390 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 MYF5P13349 255 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 GPD1P21695 349 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 ITPKBP27987 946 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 DGKEP52429 567 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 ATXN1P54253 815 aaKnown RBP6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 NHLH1Q02575 133 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 GALEQ14376 348 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 ZIK1Q3SY52 487 aaPredicted RBP6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 FAM153CQ494X1 144 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 TSTD2Q5T7W7 516 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 DCAF12L1Q5VU92 463 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 ARHGEF25Q86VW2 580 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 MICU3Q86XE3 530 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 ZNF280BQ86YH2 543 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 SLC15A3Q8IY34 581 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 HAPLN3Q96S86 360 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 GLOD4Q9HC38 313 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 ARHGEF3Q9NR81 526 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 ASB6Q9NWX5 421 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 PTGFRNQ9P2B2 879 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 CPNE7Q9UBL6 633 aa6.2□□□□□ -1.42
SCAMP1-205ENST00000614488 TMEM233B4DJY2 109 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 hCG_1984214I3L0E3 225 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 PARNO95453 639 aaKnown RBP6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 C1RP00736 705 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 IL6RP08887 468 aaPredicted RBP6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 EBLN1P0CF75 366 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 DRD4P21917 467 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 KCNA3P22001 575 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 PEX2P28328 305 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 ALDH9A1P49189 494 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 SEMA5AQ13591 1074 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 PLA1AQ53H76 456 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 ANKRD16Q6P6B7 361 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 WDR53Q7Z5U6 358 aaPredicted RBP6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 ZNF575Q86XF7 245 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 SPSB4Q96A44 273 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 TTC17Q96AE7 1141 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 CPNE5Q9HCH3 593 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 XPNPEP3Q9NQH7 507 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 IL17RBQ9NRM6 502 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 SACM1LQ9NTJ5 587 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 CHPF2Q9P2E5 772 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 OGDHLQ9ULD0 1010 aa6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 MRPS17Q9Y2R5 130 aaKnown RBP6.19□□□□□ -1.42
SCAMP1-205ENST00000614488 CCP110O43303 1012 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 NDUFB7P17568 137 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 RPL17P18621 184 aaKnown RBP6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 LIPAP38571 399 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 CCT8P50990 548 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 CLCN2P51788 898 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 FMO1Q01740 532 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 SP2Q02086 613 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 TREML2Q5T2D2 321 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 DPY19L2P1Q6NXN4 242 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 SYCE2Q6PIF2 218 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 OR56A3Q8NH54 315 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 BPIFB1Q8TDL5 484 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 RAPGEF4Q8WZA2 1011 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 MSLNLQ96KJ4 702 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 C8orf48Q96LL4 319 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 PPP1R9BQ96SB3 815 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 BTBD1Q9H0C5 482 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 ZNF287Q9HBT7 754 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 ST3GAL5Q9UNP4 418 aa6.18□□□□□ -1.42
SCAMP1-205ENST00000614488 PYCARD-AS1I3L0S3 204 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 JUPP14923 745 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 CD38P28907 300 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 INSCQ1MX18 579 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 ZNF804AQ7Z570 1209 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 RASAL3Q86YV0 1011 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 OSCP1Q8WVF1 389 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 SOCS4Q8WXH5 440 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 TBC1D5Q92609 795 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 GLG1Q92896 1179 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 DDX21Q9NR30 783 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 TRMT13Q9NUP7 481 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms