RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ANKLE1Q8NAG6 615 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 UCMAQ8WVF2 138 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 TFAP2BQ92481 460 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 HERPUD2Q9BSE4 406 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 HEMGNQ9BXL5 484 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 B4GALT4O60513 344 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 HSPA6P17066 643 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 TMEM62Q0P6H9 643 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 PDCD2Q16342 344 aaPredicted RBP17.33■□□□□ 0.36
CNOT3-208ENST00000613073 JADE1Q6IE81 842 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 PHF13Q86YI8 300 aaPredicted RBP17.33■□□□□ 0.36
CNOT3-208ENST00000613073 GBP7Q8N8V2 638 aaPredicted RBP17.33■□□□□ 0.36
CNOT3-208ENST00000613073 TTC8Q8TAM2 541 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 ATG4AQ8WYN0 398 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 MAML3Q96JK9 1138 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 NUDCD1Q96RS6 583 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 RNPEPL1Q9HAU8 725 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 RXFP1Q9HBX9 757 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 DNAJC17Q9NVM6 304 aaKnown RBP17.33■□□□□ 0.36
CNOT3-208ENST00000613073 SCN4AP35499 1836 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 PROSCO94903 275 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 CELF2O95319 508 aaKnown RBP17.32■□□□□ 0.36
CNOT3-208ENST00000613073 ACSL3O95573 720 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 ARF4P18085 180 aaPredicted RBP17.32■□□□□ 0.36
CNOT3-208ENST00000613073 COILP38432 576 aaPredicted RBP17.32■□□□□ 0.36
CNOT3-208ENST00000613073 TAS2R40P59535 323 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 AMHR2Q16671 573 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 MTHFD1LQ6UB35 978 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 GALNT15Q8N3T1 639 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 TEX9Q8N6V9 391 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 C1orf127Q8N9H9 656 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 PHC3Q8NDX5 983 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 ARHGEF2Q92974 986 aaKnown RBP17.32■□□□□ 0.36
CNOT3-208ENST00000613073 MRPL47Q9HD33 250 aaKnown RBP17.32■□□□□ 0.36
CNOT3-208ENST00000613073 FAM187AA6NFU0 413 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 ADCY6O43306 1168 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 PEX11AO75192 247 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 RNF8O76064 485 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 ITGB3P05106 788 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 CD19P15391 556 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 GNAZP19086 355 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 GCLCP48506 637 aaPredicted RBP17.32■□□□□ 0.36
CNOT3-208ENST00000613073 ZNF449Q6P9G9 518 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 FAM118BQ9BPY3 351 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 PDZD7Q9H5P4 517 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 CCDC134Q9H6E4 229 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 KLHL11Q9NVR0 708 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 SIX4Q9UIU6 781 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 RASAL2Q9UJF2 1139 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 HAO1Q9UJM8 370 aa17.32■□□□□ 0.36
CNOT3-208ENST00000613073 CEP350Q5VT06 3117 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 MAGEB2O15479 319 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 CALB2P22676 271 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 MMP8P22894 467 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 RPL21P46778 160 aaKnown RBP17.31■□□□□ 0.36
CNOT3-208ENST00000613073 SGO2Q562F6 1265 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 CYP4A22Q5TCH4 519 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 PLEKHA7Q6IQ23 1121 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 TAOK1Q7L7X3 1001 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 ANKRD23Q86SG2 305 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 DRAXINQ8NBI3 349 aaPredicted RBP17.31■□□□□ 0.36
CNOT3-208ENST00000613073 NPLOC4Q8TAT6 608 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 DDX27Q96GQ7 796 aaKnown RBP17.31■□□□□ 0.36
CNOT3-208ENST00000613073 KLHL14Q9P2G3 628 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 MORF4L1Q9UBU8 362 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 PCYOX1Q9UHG3 505 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 SP100P23497 879 aaPredicted RBP17.31■□□□□ 0.36
CNOT3-208ENST00000613073 SLC1A1P43005 524 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 MRPS35P82673 323 aaKnown RBP17.31■□□□□ 0.36
CNOT3-208ENST00000613073 KLC1Q07866 573 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 ECHDC2Q86YB7 292 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 OR6J1Q8NGC5 347 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 TGS1Q96RS0 853 aaKnown RBP17.31■□□□□ 0.36
CNOT3-208ENST00000613073 PAIP2Q9BPZ3 127 aaKnown RBP17.31■□□□□ 0.36
CNOT3-208ENST00000613073 PLVAPQ9BX97 442 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 CHST7Q9NS84 486 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 PARVAQ9NVD7 372 aa17.31■□□□□ 0.36
CNOT3-208ENST00000613073 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.31■□□□□ 0.36
CNOT3-208ENST00000613073 RBM47A0AV96 593 aaKnown RBP17.3■□□□□ 0.36
CNOT3-208ENST00000613073 ENTPD5O75356 428 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 TPBGLP0DKB5 382 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 TCF4P15884 667 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
CNOT3-208ENST00000613073 ACVR2BQ13705 512 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 GRIK4Q16099 956 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 MUM1Q2TAK8 710 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 ATP13A4Q4VNC1 1196 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 ZFYVE27Q5T4F4 411 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 WDTC1Q8N5D0 677 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 LINC01465Q8N7H1 131 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.3■□□□□ 0.36
CNOT3-208ENST00000613073 FEZF2Q8TBJ5 459 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 ERP27Q96DN0 273 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 VCPIP1Q96JH7 1222 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 TINF2Q9BSI4 451 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 SETD4Q9NVD3 440 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.3■□□□□ 0.36
CNOT3-208ENST00000613073 TBK1Q9UHD2 729 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms