RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 PARVGQ9HBI0 331 aa18.5■□□□□ 0.55
CSNK1E-215ENST00000612795 ABCB6Q9NP58 842 aa18.5■□□□□ 0.55
CSNK1E-215ENST00000612795 BCCIPQ9P287 314 aaKnown RBP eCLIP18.5■□□□□ 0.55
CSNK1E-215ENST00000612795 LIMCH1Q9UPQ0 1083 aa18.5■□□□□ 0.55
CSNK1E-215ENST00000612795 ATXN2Q99700 1313 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 K7EQS6 105 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 TNFRSF10BO14763 440 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 KRT18P05783 430 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 CYP2F1P24903 491 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 OPRD1P41143 372 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 ATXN3P54252 364 aaPredicted RBP18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 DHX8Q14562 1220 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 ARSHQ5FYA8 562 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 SYT12Q8IV01 421 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 TMEFF1Q8IYR6 380 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 HDDC3Q8N4P3 179 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 RLN3Q8WXF3 142 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 MYRFLQ96LU7 910 aa18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 MYO18AQ92614 2054 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-215ENST00000612795 VWA3AA6NCI4 1184 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 TRAK2O60296 914 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 CFIP05156 583 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 ACAT1P24752 427 aaKnown RBP18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 ABCD1P33897 745 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 P2RY2P41231 377 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 PNPLA4P41247 253 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 DPP6P42658 865 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 PDE6CP51160 858 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 MRPS21P82921 87 aaKnown RBP18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 MYL7Q01449 175 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 TMEM119Q4V9L6 283 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 ZC2HC1CQ53FD0 456 aaPredicted RBP18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 INTS6LQ5JSJ4 861 aaKnown RBP18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 LYSMD4Q5XG99 296 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 OLIG1Q8TAK6 271 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 LINC00597Q9H2U6 94 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 POLMQ9NP87 494 aaPredicted RBP18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 DDX43Q9NXZ2 648 aaKnown RBP18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 AGO2Q9UKV8 859 aaKnown RBP18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 ARHGAP26Q9UNA1 814 aa18.48■□□□□ 0.55
CSNK1E-215ENST00000612795 C2orf78A6NCI8 922 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 ANKRD63C9JTQ0 380 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 H0Y626 953 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 TBCAO75347 108 aaKnown RBP18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 TRIM16O95361 564 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 HDCP19113 662 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 PTGER3P43115 390 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 ATP2C1P98194 919 aaPredicted RBP18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 SLFN12LQ6IEE8 588 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 TMEM92Q6UXU6 159 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 SPATA2LQ8IUW3 424 aaPredicted RBP18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 SCN4BQ8IWT1 228 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 PDCL2Q8N4E4 241 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 ALLCQ8N6M5 410 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 TXNDC5Q8NBS9 432 aaKnown RBP18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 FNBP1Q96RU3 617 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 ACBD6Q9BR61 282 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 GTPBP2Q9BX10 602 aaKnown RBP18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 TMEM74BQ9NUR3 256 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 GCNT4Q9P109 453 aa18.47■□□□□ 0.55
CSNK1E-215ENST00000612795 PCDH15Q96QU1 1955 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 DSPP15924 2871 aaKnown RBP18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 ANTXRLA6NF34 631 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 TISP43B9A030 160 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 HUS1O60921 280 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 KLF8O95600 359 aaPredicted RBP18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 TCF3P15923 654 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 POLR2BP30876 1174 aaKnown RBP18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 TIE1P35590 1138 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 ZNF131P52739 623 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 SEMA3BQ13214 749 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 BYSLQ13895 437 aaKnown RBP18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 SLC23A3Q6PIS1 610 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 NT5DC4Q86YG4 428 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 PGBD3Q8N328 593 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 SPATA18Q8TC71 538 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 GTF3C4Q9UKN8 822 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 L1RE1Q9UN81 338 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 DMXL2Q8TDJ6 3036 aa18.46■□□□□ 0.55
CSNK1E-215ENST00000612795 MYMKA6NI61 221 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 TAF4O00268 1085 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 IL18RAPO95256 599 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 CYP17A1P05093 508 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 HNRNPLP14866 589 aaKnown RBP eCLIP18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 GTF2BQ00403 316 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 RILPL1Q5EBL4 403 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 EOGTQ5NDL2 527 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 PIP4P1Q86T03 277 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 TMEM86AQ8N2M4 240 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 FRMD1Q8N878 549 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 HMGB4Q8WW32 186 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 POMGNT1Q8WZA1 660 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 CALML4Q96GE6 196 aa18.45■□□□□ 0.54
CSNK1E-215ENST00000612795 UPK3BL1B0FP48 263 aa18.44■□□□□ 0.54
CSNK1E-215ENST00000612795 UPK3BL2E5RIL1 263 aa18.44■□□□□ 0.54
CSNK1E-215ENST00000612795 SGK1O00141 431 aa18.44■□□□□ 0.54
CSNK1E-215ENST00000612795 LEFTY2O00292 366 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms