RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 CCR3P51677 355 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 LRRC32Q14392 662 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 KCNB1Q14721 858 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 UNC13DQ70J99 1090 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 SPATA2LQ8IUW3 424 aaPredicted RBP23.27■■□□□ 1.31
CBWD3-207ENST00000611426 DCLK2Q8N568 766 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 STKLD1Q8NE28 680 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 ANP32BQ92688 251 aaKnown RBP23.27■■□□□ 1.31
CBWD3-207ENST00000611426 PKMYT1Q99640 499 aa23.27■■□□□ 1.31
CBWD3-207ENST00000611426 GTPBP4Q9BZE4 634 aaKnown RBP23.27■■□□□ 1.31
CBWD3-207ENST00000611426 BIN1O00499 593 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 TGFB1I1O43294 461 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 HCRTO43612 131 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 LILRB5O75023 590 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 CTHP32929 405 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 NRLP54845 237 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 TNK2Q07912 1038 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 TXNDC8Q6A555 127 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 TXNDC11Q6PKC3 985 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 LUZP1Q86V48 1076 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 WDR49Q8IV35 697 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 MRPS31Q92665 395 aaKnown RBP23.26■■□□□ 1.31
CBWD3-207ENST00000611426 BLZF1Q9H2G9 400 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 AGPAT3Q9NRZ7 376 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 RMND1Q9NWS8 449 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 DACH1Q9UI36 760 aa23.26■■□□□ 1.31
CBWD3-207ENST00000611426 DENND4CQ5VZ89 1909 aa23.25■■□□□ 1.31
CBWD3-207ENST00000611426 CASP1P29466 404 aa23.25■■□□□ 1.31
CBWD3-207ENST00000611426 CXCL12P48061 93 aa23.25■■□□□ 1.31
CBWD3-207ENST00000611426 CCDC173Q0VFZ6 552 aa23.25■■□□□ 1.31
CBWD3-207ENST00000611426 SNRNP35Q16560 246 aaKnown RBP23.25■■□□□ 1.31
CBWD3-207ENST00000611426 DHX40Q8IX18 779 aaKnown RBP23.25■■□□□ 1.31
CBWD3-207ENST00000611426 NELFCDQ8IXH7 590 aa23.25■■□□□ 1.31
CBWD3-207ENST00000611426 SCFD1Q8WVM8 642 aa23.25■■□□□ 1.31
CBWD3-207ENST00000611426 GKN1Q9NS71 199 aa23.25■■□□□ 1.31
CBWD3-207ENST00000611426 RBM12Q9NTZ6 932 aaKnown RBP23.25■■□□□ 1.31
CBWD3-207ENST00000611426 NCDNQ9UBB6 729 aa23.25■■□□□ 1.31
CBWD3-207ENST00000611426 UXTQ9UBK9 157 aaPredicted RBP23.25■■□□□ 1.31
CBWD3-207ENST00000611426 DMXL1Q9Y485 3027 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 ZNF638Q14966 1978 aaKnown RBP23.24■■□□□ 1.31
CBWD3-207ENST00000611426 DCHS1Q96JQ0 3298 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.24■■□□□ 1.31
CBWD3-207ENST00000611426 SOBPA7XYQ1 873 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 CLIC2O15247 247 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 NOL4O94818 638 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 DLATP10515 647 aaKnown RBP23.24■■□□□ 1.31
CBWD3-207ENST00000611426 TNNI1P19237 187 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 CYP2J2P51589 502 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 SNRPFP62306 86 aaKnown RBP23.24■■□□□ 1.31
CBWD3-207ENST00000611426 CCDC142Q17RM4 750 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 ITPRIPL2Q3MIP1 535 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 CFAP221Q4G0U5 840 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 DGKKQ5KSL6 1271 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 HS2ST1Q7LGA3 356 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 TRAPPC11Q7Z392 1133 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 MON1AQ86VX9 555 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 SCN4BQ8IWT1 228 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 SPEM1Q8N4L4 309 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 USP13Q92995 863 aaPredicted RBP23.24■■□□□ 1.31
CBWD3-207ENST00000611426 FUBP3Q96I24 572 aaKnown RBP eCLIP23.24■■□□□ 1.31
CBWD3-207ENST00000611426 FNBP1Q96RU3 617 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 EPC1Q9H2F5 836 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 TDP1Q9NUW8 608 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 CCL26Q9Y258 94 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 GPR179Q6PRD1 2367 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 UBE4BO95155 1302 aa23.24■■□□□ 1.31
CBWD3-207ENST00000611426 ATP2C2O75185 946 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 TDGF1P13385 188 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 LMO2P25791 158 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 ERCC5P28715 1186 aaPredicted RBP23.23■■□□□ 1.31
CBWD3-207ENST00000611426 EHHADHQ08426 723 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 CUL4BQ13620 913 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 GAS6Q14393 721 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 PON2Q15165 354 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 FAM171BQ6P995 826 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 C4orf50Q6ZRC1 276 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 LIMS2Q7Z4I7 341 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 XXYLT1Q8NBI6 393 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 KBTBD7Q8WVZ9 684 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 CCDC127Q96BQ5 260 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 TRMT2BQ96GJ1 504 aaKnown RBP23.23■■□□□ 1.31
CBWD3-207ENST00000611426 MMS19Q96T76 1030 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 SLC39A2Q9NP94 309 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 MAGEC2Q9UBF1 373 aaPredicted RBP23.23■■□□□ 1.31
CBWD3-207ENST00000611426 CDH9Q9ULB4 789 aa23.23■■□□□ 1.31
CBWD3-207ENST00000611426 PVALEFA0A1B0GWK0 134 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 KLRC4O43908 158 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 RPN1P04843 607 aaKnown RBP23.22■■□□□ 1.31
CBWD3-207ENST00000611426 FOXK2Q01167 660 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 SATB1Q01826 763 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 SARM1Q6SZW1 724 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 SECISBP2LQ93073 1101 aaKnown RBP23.22■■□□□ 1.31
CBWD3-207ENST00000611426 MYRFLQ96LU7 910 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 FAM83CQ9BQN1 747 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 SYT15Q9BQS2 421 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 KIF9Q9HAQ2 790 aa23.22■■□□□ 1.31
CBWD3-207ENST00000611426 SMG5Q9UPR3 1016 aaKnown RBP23.22■■□□□ 1.31
CBWD3-207ENST00000611426 KIF26AQ9ULI4 1882 aaPredicted RBP23.22■■□□□ 1.31
CBWD3-207ENST00000611426 OBSL1O75147 1896 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 SMTNL1A8MU46 457 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms