RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CBLBQ13191 982 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 DCAF4L1Q3SXM0 396 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 CCDC38Q502W7 563 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 ANKRD20A8PQ5CZ79 823 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 ZC3H12AQ5D1E8 599 aaKnown RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 CDR2LQ86X02 465 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 VSIG1Q86XK7 387 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 KCTD6Q8NC69 237 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 ACTL9Q8TC94 416 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 GRAMD1AQ96CP6 724 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 SLC10A4Q96EP9 437 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 C9orf72Q96LT7 481 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 HEXIM2Q96MH2 286 aaKnown RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 C16orf70Q9BSU1 422 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 CNPY3Q9BT09 278 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 NT5C1AQ9BXI3 368 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 SMYD3Q9H7B4 428 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 KCNK9Q9NPC2 374 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 METTL5Q9NRN9 209 aaKnown RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 DNAJC17Q9NVM6 304 aaKnown RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 DPP3Q9NY33 737 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 MORF4L1Q9UBU8 362 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 AGAP1Q9UPQ3 857 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 MCM3APO60318 1980 aa10.96□□□□□ -0.66
PABPC1-224ENST00000610907 EVPLQ92817 2033 aa10.96□□□□□ -0.66
PABPC1-224ENST00000610907 EXOC1LA0A1B0GW35 172 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 RRN3P2A6NIE6 340 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 H3BRB1 525 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 M0QYV0 167 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 SNX3O60493 162 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 TSPAN1O60635 241 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 CETPP11597 493 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 IL1R2P27930 398 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 ADORA2AP29274 412 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 PHBP35232 272 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 ARL4CP56559 192 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 OTUD4Q01804 1114 aaKnown RBP10.95□□□□□ -0.66
PABPC1-224ENST00000610907 TFDP2Q14188 446 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 FAM47CQ5HY64 1035 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 TMEM63BQ5T3F8 832 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 CCDC13Q8IYE1 715 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 KIAA0319LQ8IZA0 1049 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 GLIS1Q8NBF1 620 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 NLRP7Q8WX94 980 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 RSAD2Q8WXG1 361 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-224ENST00000610907 USP6NLQ92738 828 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 ZNF668Q96K58 619 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-224ENST00000610907 MAGEB18Q96M61 343 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 PWWP2AQ96N64 755 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 TWNKQ96RR1 684 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 TMEM121Q9BTD3 319 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 KATNBL1Q9H079 304 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 TUT1Q9H6E5 874 aaKnown RBP10.95□□□□□ -0.66
PABPC1-224ENST00000610907 ZWILCHQ9H900 591 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-224ENST00000610907 USP18Q9UMW8 372 aa10.95□□□□□ -0.66
PABPC1-224ENST00000610907 SMG5Q9UPR3 1016 aaKnown RBP10.95□□□□□ -0.66
PABPC1-224ENST00000610907 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 FAM47DPA6NHR8 397 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 RASA4BC9J798 803 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 E7ESA3 106 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 PRPF4O43172 522 aaKnown RBP eCLIP10.94□□□□□ -0.664e-10■■□□□ 13.4
PABPC1-224ENST00000610907 RASA4O43374 803 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 DNAJC8O75937 253 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 SUN1O94901 812 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 OAS1P00973 400 aaKnown RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 ZSCAN5DPP0CG00 497 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 DESP17661 470 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 GPD1P21695 349 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 MIPP30301 263 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 STX2P32856 288 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 GJA5P36382 358 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 IFNAR2P48551 515 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 NDST1P52848 882 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 IL9RQ01113 521 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 IRF5Q13568 498 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 PDK2Q15119 407 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 HIF1AQ16665 826 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 BOLA3Q53S33 107 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 C9orf131Q5VYM1 1079 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 CYP4F22Q6NT55 531 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 TRABD2AQ86V40 505 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 ZDHHC17Q8IUH5 632 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 MAP7D3Q8IWC1 876 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 SUGP1Q8IWZ8 645 aaKnown RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 CYP4X1Q8N118 509 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 GBP7Q8N8V2 638 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 NAT8LQ8N9F0 302 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 STK32AQ8WU08 396 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 CPB2Q96IY4 423 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 TSPAN18Q96SJ8 248 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 ELAC2Q9BQ52 826 aaKnown RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 MAK16Q9BXY0 300 aaKnown RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 SSU72Q9NP77 194 aaKnown RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 ZMYND8Q9ULU4 1186 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 USP15Q9Y4E8 981 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-224ENST00000610907 MGAMO43451 1857 aa10.94□□□□□ -0.66
PABPC1-224ENST00000610907 C2CD4BA6NLJ0 364 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms