RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TRMT10CQ7L0Y3 403 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 NT5DC3Q86UY8 548 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 PGLYRP2Q96PD5 576 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 COLEC11Q9BWP8 271 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 TRABDQ9H4I3 376 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 VIPAS39Q9H9C1 493 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 HMX1Q9NP08 348 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 TXNDC9O14530 226 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 HSD17B3P37058 310 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 CTCFP49711 727 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 PAPOLAP51003 745 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 KCTD19Q17RG1 926 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 OVOS1Q6IE37 1185 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 HIBCHQ6NVY1 386 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 MTHFD1LQ6UB35 978 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 CRLF3Q8IUI8 442 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 UPF1Q92900 1129 aaKnown RBP eCLIP7.6□□□□□ -1.192e-6■■□□□ 14.2
CSDE1-218ENST00000610726 LENG9Q96B70 501 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 ALKBH8Q96BT7 664 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 TGS1Q96RS0 853 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 FUT8Q9BYC5 575 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 MRPL42Q9Y6G3 142 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 F8VP50 259 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 NEMP1O14524 444 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 MICAL2O94851 1124 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ATXN8OSP0DMR3 200 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ARF4P18085 180 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ETFBP38117 255 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 PBX1P40424 430 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 SCNN1GP51170 649 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 GTF2A1P52655 376 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ADIGQ0VDE8 80 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 BST2Q10589 180 aaKnown RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 NFIL3Q16649 462 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 DUSP28Q4G0W2 176 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ELMSAN1Q6PJG2 1045 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 IPMKQ8NFU5 416 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 LNX1Q8TBB1 728 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ADAM32Q8TC27 787 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 SHC3Q92529 594 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 SEPT8Q92599 483 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 RUBCNQ92622 972 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ASIC4Q96FT7 647 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 TRIM55Q9BYV6 548 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 MAGEB5Q9BZ81 275 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 PPARGC1AQ9UBK2 798 aaKnown RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 L1RE1Q9UN81 338 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 CDY2AQ9Y6F7 541 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 PJA2O43164 708 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 PRKAR2AP13861 404 aaKnown RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 DNAJB2P25686 324 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 NNMTP40261 264 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 MLH1P40692 756 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ALDH1A3P47895 512 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 LHX1P48742 406 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 DMTNQ08495 405 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 AADACL2Q6P093 401 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 SPOCD1Q6ZMY3 1216 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 TRIM67Q6ZTA4 783 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 IRF2BP2Q7Z5L9 587 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 RASSF3Q86WH2 238 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 NUDCD3Q8IVD9 361 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 WDR75Q8IWA0 830 aaKnown RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 AGR3Q8TD06 166 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 SEMA4DQ92854 862 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 LENG1Q96BZ8 264 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 RPRD1AQ96P16 312 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 RAB3IPQ96QF0 476 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ANKZF1Q9H8Y5 726 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 WRAP73Q9P2S5 460 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 RBPJLQ9UBG7 517 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 MID2Q9UJV3 735 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 AP4E1Q9UPM8 1137 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 E2F8A0AVK6 867 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 E5RJQ4 531 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 PDE2AO00408 941 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 PPP1R37O75864 691 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ELNP15502 786 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 H2AFXP16104 143 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 STIP1P31948 543 aaKnown RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 COPS2P61201 443 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 YWHAHQ04917 246 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 NSUN2Q08J23 767 aaKnown RBP eCLIP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 COBLL1Q53SF7 1204 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 SPRYD7Q5W111 196 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 WDR93Q6P2C0 686 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 MFSD7Q6UXD7 560 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 CREG2Q8IUH2 290 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 FAM71AQ8IYT1 594 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 EXD1Q8NHP7 514 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 HNRNPLLQ8WVV9 542 aaKnown RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 FBXO32Q969P5 355 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 RSRC1Q96IZ7 334 aaKnown RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 FAM8A1Q9UBU6 413 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 TRPV2Q9Y5S1 764 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 ALS2Q96Q42 1657 aa7.59□□□□□ -1.19
CSDE1-218ENST00000610726 AHDC1Q5TGY3 1603 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-218ENST00000610726 PMPCBO75439 489 aa7.59□□□□□ -1.2
CSDE1-218ENST00000610726 ALDH2P05091 517 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms