RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 USP46P62068 366 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 MAPRE1Q15691 268 aaKnown RBP15.43■□□□□ 0.06
HDDC2-204ENST00000608295 SGSM1Q2NKQ1 1148 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 CCDC40Q4G0X9 1142 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 CBWD6Q4V339 395 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 CBWD3Q5JTY5 395 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 CBWD5Q5RIA9 395 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 FAM35AQ86V20 835 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 MYCBPAPQ8TBZ2 947 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 MRPS31Q92665 395 aaKnown RBP15.43■□□□□ 0.06
HDDC2-204ENST00000608295 SEMA4DQ92854 862 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 FAM122AQ96E09 287 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 FUBP3Q96I24 572 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDDC2-204ENST00000608295 TWNKQ96RR1 684 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 SLC46A2Q9BY10 475 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 TASP1Q9H6P5 420 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 TMEM8AQ9HCN3 771 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 KRT82Q9NSB4 513 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 CCL26Q9Y258 94 aa15.43■□□□□ 0.06
HDDC2-204ENST00000608295 WDFY4Q6ZS81 3184 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 H0Y858 1186 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 IKBKBO14920 756 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 MAPK13O15264 365 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 NOL4O94818 638 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 MICAL2O94851 1124 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 FGF19O95750 216 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 ABL1P00519 1130 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 F11P03951 625 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 PSMC3P17980 439 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 CCNE1P24864 410 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 ADORA2BP29275 332 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 SOX9P48436 509 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 LRMPQ12912 555 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 SLC44A4Q53GD3 710 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 ZNF394Q53GI3 561 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 KRT39Q6A163 491 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 TMEM174Q8WUU8 243 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 LRRC3BQ96PB8 259 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 PHOX2BQ99453 314 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 ARID3AQ99856 593 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 NIF3L1Q9GZT8 377 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 VRTNQ9H8Y1 702 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 NDRG2Q9UN36 371 aaKnown RBP15.42■□□□□ 0.06
HDDC2-204ENST00000608295 MTF2Q9Y483 593 aaPredicted RBP15.42■□□□□ 0.06
HDDC2-204ENST00000608295 PATJQ8NI35 1801 aa15.42■□□□□ 0.06
HDDC2-204ENST00000608295 C2orf78A6NCI8 922 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 SCAMP3O14828 347 aaKnown RBP15.41■□□□□ 0.06
HDDC2-204ENST00000608295 ZNF263O14978 683 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 SLC16A3O15427 465 aaKnown RBP15.41■□□□□ 0.06
HDDC2-204ENST00000608295 AVPR1AP37288 418 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 PLA2G5P39877 138 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 MAGEA11P43364 429 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 FKBP3Q00688 224 aaKnown RBP15.41■□□□□ 0.06
HDDC2-204ENST00000608295 PFKPQ01813 784 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 LRRC63Q05C16 580 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 TCF15Q12870 199 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 MORC3Q14149 939 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 C12orf29Q8N999 325 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 CCDC150Q8NCX0 1101 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 RIN3Q8TB24 985 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 SLC2A14Q8TDB8 520 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 SLC22A12Q96S37 553 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 KCNK16Q96T55 309 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 DUSP9Q99956 384 aaKnown RBP15.41■□□□□ 0.06
HDDC2-204ENST00000608295 GPR88Q9GZN0 384 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 ELOVL4Q9GZR5 314 aa15.41■□□□□ 0.06
HDDC2-204ENST00000608295 PPP1R3GB7ZBB8 358 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 TRIM66O15016 1216 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 AP1G2O75843 785 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 CKMP06732 381 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 NHLH1Q02575 133 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 TNK2Q07912 1038 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 TTI2Q6NXR4 508 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 VSTM1Q6UX27 236 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 DENND5BQ6ZUT9 1274 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 CREBRFQ8IUR6 639 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 CMTM8Q8IZV2 173 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 PJA1Q8NG27 643 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 DEPDC1BQ8WUY9 529 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 DHTKD1Q96HY7 919 aaPredicted RBP15.4■□□□□ 0.06
HDDC2-204ENST00000608295 TNIP3Q96KP6 325 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 CYP2S1Q96SQ9 504 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 ARMCX3Q9UH62 379 aaPredicted RBP15.4■□□□□ 0.06
HDDC2-204ENST00000608295 PIAS3Q9Y6X2 628 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 ATP8B3O60423 1300 aa15.4■□□□□ 0.06
HDDC2-204ENST00000608295 TARSP26639 723 aaKnown RBP15.39■□□□□ 0.05
HDDC2-204ENST00000608295 CLCN5P51795 746 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 PAK1Q13153 545 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 TRIM68Q6AZZ1 485 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 MFSD6LQ8IWD5 586 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 ZC3H3Q8IXZ2 948 aaKnown RBP15.39■□□□□ 0.05
HDDC2-204ENST00000608295 FUKQ8N0W3 1084 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 ARL14EPQ8N8R7 260 aaPredicted RBP15.39■□□□□ 0.05
HDDC2-204ENST00000608295 FBXL13Q8NEE6 735 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 BPIFB1Q8TDL5 484 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 CSGALNACT1Q8TDX6 532 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 TAF4BQ92750 862 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 IRF7Q92985 503 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 USP13Q92995 863 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms