RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, human

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UCHL3-204	ENST00000606347	CLCN2	P51788	898 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	HK3	P52790	923 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	FAM50A	Q14320	339 aa	Known RBP	4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	PTPN21	Q16825	1174 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	ZNF618	Q5T7W0	954 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	FBXL22	Q6P050	247 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	SHC4	Q6S5L8	630 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	TMEM108	Q6UXF1	575 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	CATSPERG	Q6ZRH7	1159 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	HEATR3	Q7Z4Q2	680 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	DTX2	Q86UW9	622 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	PNMA8A	Q86V59	439 aa	Predicted RBP	4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	PRPF38A	Q8NAV1	312 aa	Known RBP	4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	TMEM255B	Q8WV15	326 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	TBC1D5	Q92609	795 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	TNPO1	Q92973	898 aa	Known RBP	4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	C5orf34	Q96MH7	638 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	MACROD1	Q9BQ69	325 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	ABCF2	Q9UG63	623 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	POLH	Q9Y253	713 aa		4.14	□□□□□ -1.75
UCHL3-204	ENST00000606347	MYO1F	O00160	1098 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	ADAMTS3	O15072	1205 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	NXPH3	O95157	252 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	FGB	P02675	491 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	IL6R	P08887	468 aa	Predicted RBP	4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	FAM163B	P0C2L3	166 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	TNFRSF1B	P20333	461 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	PDC	P20941	246 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	MAP2K6	P52564	334 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	AARS2	Q5JTZ9	985 aa	Known RBP	4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	MIS18BP1	Q6P0N0	1132 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	ANKRD16	Q6P6B7	361 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	FAM46D	Q8NEK8	389 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	THOC3	Q96J01	351 aa	Known RBP	4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	WDCP	Q9H6R7	721 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	KLHL42	Q9P2K6	505 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	HESX1	Q9UBX0	185 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	SSX2IP	Q9Y2D8	614 aa		4.13	□□□□□ -1.75
UCHL3-204	ENST00000606347	SLC16A6	O15403	523 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	ARIH2	O95376	493 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	PIM1	P11309	404 aa	Predicted RBP	4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	TYR	P14679	529 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	NDUFB7	P17568	137 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	CYP4F2	P78329	520 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	UBAP2	Q5T6F2	1119 aa	Known RBP	4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	FAM160B1	Q5W0V3	765 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	GSG1L	Q6UXU4	331 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	SLC29A4	Q7RTT9	530 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	FANCB	Q8NB91	859 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	STAG1	Q8WVM7	1258 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	SLC46A1	Q96NT5	459 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	KRTAP4-3	Q9BYR4	195 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	ASPSCR1	Q9BZE9	553 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	SIK2	Q9H0K1	926 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	DUSP22	Q9NRW4	184 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	WASHC2C	Q9Y4E1	1318 aa		4.12	□□□□□ -1.75
UCHL3-204	ENST00000606347	NOTCH3	Q9UM47	2321 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347		E5RJQ4	531 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	SMAD6	O43541	496 aa	Known RBP	4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	FTL	P02792	175 aa	Predicted RBP	4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	TMEM191B	P0C7N4	346 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	CYP2C18	P33260	490 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	EEFSEC	P57772	596 aa	Known RBP	4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	EXOSC9	Q06265	439 aa	Known RBP	4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	TREML2	Q5T2D2	321 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	TEDDM1	Q5T9Z0	273 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	ICE2	Q659A1	982 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	C9orf47	Q6ZRZ4	202 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	DCP1B	Q8IZD4	617 aa	Known RBP	4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	MIER2	Q8N344	545 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	TTYH3	Q9C0H2	523 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	DDX56	Q9NY93	547 aa	Known RBP	4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	SERTAD3	Q9UJW9	196 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	PCDHA1	Q9Y5I3	950 aa		4.11	□□□□□ -1.75
UCHL3-204	ENST00000606347	ERC2	O15083	957 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	SLC16A3	O15427	465 aa	Known RBP	4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	BCAR3	O75815	825 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	FES	P07332	822 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	POU2F2	P09086	479 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	ENG	P17813	658 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	HDC	P19113	662 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	HILS1	P60008	231 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	NKX6-1	P78426	367 aa	Predicted RBP	4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	NPY5R	Q15761	445 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	PLEKHG6	Q3KR16	790 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	EMC10	Q5UCC4	262 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	USP45	Q70EL2	814 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	CATIP	Q7Z7H3	387 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	CHSY1	Q86X52	802 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	CPA6	Q8N4T0	437 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	CELF5	Q8N6W0	485 aa	Known RBP	4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	PNLDC1	Q8NA58	520 aa	Known RBP	4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	PIGO	Q8TEQ8	1089 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	ATG4A	Q8WYN0	398 aa		4.1	□□□□□ -1.75
UCHL3-204	ENST00000606347	DDX17	Q92841	729 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms