RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 ZRANB2O95218 330 aaKnown RBP eCLIP20.22■□□□□ 0.835e-9■□□□□ 10.7
TUBB4B-202ENST00000604929 TKTP29401 623 aaKnown RBP20.22■□□□□ 0.83
TUBB4B-202ENST00000604929 MAN1A1P33908 653 aa20.22■□□□□ 0.83
TUBB4B-202ENST00000604929 ZNF280BQ86YH2 543 aa20.22■□□□□ 0.83
TUBB4B-202ENST00000604929 HNRNPLLQ8WVV9 542 aaKnown RBP20.22■□□□□ 0.83
TUBB4B-202ENST00000604929 IFT81Q8WYA0 676 aa20.22■□□□□ 0.83
TUBB4B-202ENST00000604929 RNF25Q96BH1 459 aaPredicted RBP20.22■□□□□ 0.83
TUBB4B-202ENST00000604929 GOLGA6L10A0A0M3HER8 536 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 PI4K2BG5E9Z4 385 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 PSTPIP1O43586 416 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 EOMESO95936 686 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 ITGB1P05556 798 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 MCM3P25205 808 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 TUSC3Q13454 348 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 CLLU1OSQ5K130 101 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 GLB1LQ6UWU2 654 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 ARFGAP1Q8N6T3 406 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 PLVAPQ9BX97 442 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 SLC4A5Q9BY07 1137 aa20.21■□□□□ 0.83
TUBB4B-202ENST00000604929 RARAP10276 462 aa20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 LCP1P13796 627 aa20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 BST2Q10589 180 aaKnown RBP20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 MDH1BQ5I0G3 518 aa20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 TMEM110Q86TL2 294 aa20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 FUKQ8N0W3 1084 aa20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 PRELID2Q8N945 189 aa20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 SCLYQ96I15 445 aa20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 HERPUD2Q9BSE4 406 aa20.2■□□□□ 0.83
TUBB4B-202ENST00000604929 TTI1O43156 1089 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 B4GALT3O60512 393 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 DDHD2O94830 711 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 CCL23P55773 120 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 GSCP56915 257 aaPredicted RBP20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 FAM189BP81408 668 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 CLUL1Q15846 466 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 SH3PXD2AQ5TCZ1 1133 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 CD300LGQ6UXG3 332 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 ANKS1BQ7Z6G8 1248 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 CLEC4CQ8WTT0 213 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 DNAI2Q9GZS0 605 aa20.2■□□□□ 0.82
TUBB4B-202ENST00000604929 TDRD15B5MCY1 1934 aaKnown RBP20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 MYBPHLA2RUH7 354 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 ENPP3O14638 875 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 PAPSS1O43252 624 aaPredicted RBP20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 BEST1O76090 585 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 RALAP11233 206 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 LHX1P48742 406 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 BCAT1P54687 386 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 SMC1AQ14683 1233 aaKnown RBP20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 KCNT1Q5JUK3 1230 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 PAQR9Q6ZVX9 377 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 CCDC26Q8TAB7 109 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 MAGOHBQ96A72 148 aaKnown RBP20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 MED10Q9BTT4 135 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 FTHL17Q9BXU8 183 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 ZWILCHQ9H900 591 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 CRTAC1Q9NQ79 661 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 PCSK1NQ9UHG2 260 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 LRCH4O75427 683 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 SASH3O75995 380 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 SETSIPP0DME0 302 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 PDGFRAP16234 1089 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 FLT3P36888 993 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 CARSP49589 748 aaKnown RBP20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 RABGGTBP53611 331 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 SMTNL2Q2TAL5 461 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 TRNP1Q6NT89 227 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 IFT20Q8IY31 132 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 KATNAL2Q8IYT4 538 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 TMEM86AQ8N2M4 240 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 NIPA2Q8N8Q9 360 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 RXFP2Q8WXD0 754 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 HNRNPABQ99729 332 aaKnown RBP20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 MTUS1Q9ULD2 1270 aa20.19■□□□□ 0.82
TUBB4B-202ENST00000604929 SPDYE4A6NLX3 237 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 FSCN2O14926 492 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 FAM163BP0C2L3 166 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 AARSP49588 968 aaKnown RBP eCLIP20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 SLC6A3Q01959 620 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 TCTN1Q2MV58 587 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 C15orf59Q2T9L4 293 aaPredicted RBP20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 RAB6CQ53S08 254 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 PLEKHG4Q58EX7 1191 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 NOMO2Q5JPE7 1267 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 OLFML1Q6UWY5 402 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 SLC39A5Q6ZMH5 540 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 MAATS1Q7Z4T9 603 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 FNIP1Q8TF40 1166 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 STK32AQ8WU08 396 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 C1orf54Q8WWF1 131 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 SYT15Q9BQS2 421 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 FUT8Q9BYC5 575 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 SEZ6LQ9BYH1 1024 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 PPP1R12CQ9BZL4 782 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 RAB6CQ9H0N0 254 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 SLITRK6Q9H5Y7 841 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 GDF3Q9NR23 364 aa20.18■□□□□ 0.82
TUBB4B-202ENST00000604929 IL1R2P27930 398 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 KCNJ1P48048 391 aa20.17■□□□□ 0.82
TUBB4B-202ENST00000604929 RNASELQ05823 741 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms