RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 IL21Q9HBE4 155 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 KRBA1A5PL33 1030 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 HEPACAM2A8MVW5 462 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 MAN2B1O00754 1011 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 NCAM2O15394 837 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 HCRTO43612 131 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 F11P03951 625 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 GDI1P31150 447 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 MAGEA9P43362 315 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 GPR15P49685 360 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 CDR1P51861 262 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 VCPP55072 806 aaKnown RBP12.29□□□□□ -0.44
CCDC12-209ENST00000604164 MLLT6P55198 1093 aaPredicted RBP12.29□□□□□ -0.44
CCDC12-209ENST00000604164 PAK1Q13153 545 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 ARHGAP29Q52LW3 1261 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
CCDC12-209ENST00000604164 VITQ6UXI7 678 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 DENND5BQ6ZUT9 1274 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 MON1AQ86VX9 555 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 CMTM8Q8IZV2 173 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 CELF5Q8N6W0 485 aaKnown RBP12.29□□□□□ -0.44
CCDC12-209ENST00000604164 CSGALNACT1Q8TDX6 532 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 TAS1R2Q8TE23 839 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 NELFBQ8WX92 580 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 SMARCD1Q96GM5 515 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 GBP4Q96PP9 640 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 MED10Q9BTT4 135 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 BCO2Q9BYV7 579 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 RAB20Q9NX57 234 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 SIT1Q9Y3P8 196 aa12.29□□□□□ -0.44
CCDC12-209ENST00000604164 TRAV19A0A0A6YYK7 116 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 KANSL1LA0AUZ9 987 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 GOLGA6L22H0YM25 854 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 CHADO15335 359 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
CCDC12-209ENST00000604164 RTN3O95197 1032 aaPredicted RBP12.28□□□□□ -0.44
CCDC12-209ENST00000604164 NPR3P17342 541 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 PLA2G5P39877 138 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 VIPR2P41587 438 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 ASPAP45381 313 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 NDST1P52848 882 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 CDH8P55286 799 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 YWHAEP62258 255 aaKnown RBP12.28□□□□□ -0.44
CCDC12-209ENST00000604164 CYP4F8P98187 520 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 FCHO2Q0JRZ9 810 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 INCA1Q0VD86 236 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 GRM2Q14416 872 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 ZNF268Q14587 947 aaPredicted RBP12.28□□□□□ -0.44
CCDC12-209ENST00000604164 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 SDHAF4Q5VUM1 108 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 CWF19L1Q69YN2 538 aaKnown RBP12.28□□□□□ -0.44
CCDC12-209ENST00000604164 ISM2Q6H9L7 571 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 KLHL10Q6JEL2 608 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 ZNF852Q6ZMS4 543 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 CRYBG2Q8N1P7 616 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 MAB21L3Q8N8X9 362 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 ST13P5Q8NFI4 369 aaPredicted RBP12.28□□□□□ -0.44
CCDC12-209ENST00000604164 BPIFB1Q8TDL5 484 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 EEF2KMTQ96G04 330 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 SLITRK1Q96PX8 696 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 NT5C1AQ9BXI3 368 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 PLA2G2FQ9BZM2 168 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 DPEP3Q9H4B8 488 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 DMAP1Q9NPF5 467 aaPredicted RBP12.28□□□□□ -0.44
CCDC12-209ENST00000604164 TDP1Q9NUW8 608 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 COMMD8Q9NX08 183 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 TRPM5Q9NZQ8 1165 aa12.28□□□□□ -0.44
CCDC12-209ENST00000604164 TRIM49BA6NDI0 452 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 F8VP50 259 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 BIN1O00499 593 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 USP17L7P0C7H9 530 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 RAP1GAPP47736 663 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 PMS1P54277 932 aaKnown RBP12.27□□□□□ -0.45
CCDC12-209ENST00000604164 STXBP5Q5T5C0 1151 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 SPOPLQ6IQ16 392 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 CC2D1AQ6P1N0 951 aaPredicted RBP12.27□□□□□ -0.45
CCDC12-209ENST00000604164 TPRG1Q6ZUI0 275 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 ACOT1Q86TX2 421 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 FAM35AQ86V20 835 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 NUP93Q8N1F7 819 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 TMEM105Q8N8V8 129 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 STKLD1Q8NE28 680 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 PJA1Q8NG27 643 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 OVCA2Q8WZ82 227 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.45
CCDC12-209ENST00000604164 TTLL2Q9BWV7 592 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 SLC46A2Q9BY10 475 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 C8orf33Q9H7E9 229 aaPredicted RBP12.27□□□□□ -0.45
CCDC12-209ENST00000604164 RAPGEFL1Q9UHV5 662 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 CTNND2Q9UQB3 1225 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 COQ4Q9Y3A0 265 aa12.27□□□□□ -0.45
CCDC12-209ENST00000604164 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 NRG2O14511 850 aaPredicted RBP12.26□□□□□ -0.45
CCDC12-209ENST00000604164 PMM2O15305 246 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms