RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 CDC25CP30307 473 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 GPR15P49685 360 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 EPHA5P54756 1037 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 KRT31Q15323 416 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 ARHGAP15Q53QZ3 475 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 MIIPQ5JXC2 388 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 SDHAF4Q5VUM1 108 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 TMEM270Q6UE05 265 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 ITFG1Q8TB96 612 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 SLC2A14Q8TDB8 520 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 GPR152Q8TDT2 470 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 WHAMMQ8TF30 809 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 ING5Q8WYH8 240 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 CYFIP2Q96F07 1278 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 SPATA17Q96L03 361 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 C8orf48Q96LL4 319 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 TWNKQ96RR1 684 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 MYADMQ96S97 322 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 COL25A1Q9BXS0 654 aaPredicted RBP17■□□□□ 0.31
PPFIA3-213ENST00000602905 VPS16Q9H269 839 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 DMAP1Q9NPF5 467 aaPredicted RBP17■□□□□ 0.31
PPFIA3-213ENST00000602905 APEX2Q9UBZ4 518 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 DENND4CQ5VZ89 1909 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 A0A0C4DFX4 3053 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 F8VP50 259 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 LAMP2P13473 410 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 CD19P15391 556 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 SLC9A1P19634 815 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 PON1P27169 355 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 GABRR2P28476 465 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 RAD23BP54727 409 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 SLC8A3P57103 927 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 PRSS36Q5K4E3 855 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 DENND5BQ6ZUT9 1274 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 ARHGEF19Q8IW93 802 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 C12orf29Q8N999 325 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 SLC4A11Q8NBS3 891 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 FGF13Q92913 245 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 HNRNPABQ99729 332 aaKnown RBP16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 GPR88Q9GZN0 384 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 ATXN3LQ9H3M9 355 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 SLITRK6Q9H5Y7 841 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 KRT82Q9NSB4 513 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 GDE1Q9NZC3 331 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 EPS15L1Q9UBC2 864 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 LIMA1Q9UHB6 759 aaKnown RBP16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 KIAA1257Q9ULG3 409 aa16.99■□□□□ 0.31
PPFIA3-213ENST00000602905 A0A1W2PRU2 124 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 GOLGA6L19H0YKK7 550 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 NOL4O94818 638 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 PAEPP09466 180 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 VDRP11473 427 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 KRT5P13647 590 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 CEBPBP17676 345 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 COPB1P53618 953 aaKnown RBP16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 NCAPHQ15003 741 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 SLC5A9Q2M3M2 681 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 SGO2Q562F6 1265 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 PHLDB3Q6NSJ2 640 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 MTSS1LQ765P7 747 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 TMC8Q8IU68 726 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 RNF135Q8IUD6 432 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 DHX40Q8IX18 779 aaKnown RBP16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 FUKQ8N0W3 1084 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 NXPE3Q969Y0 559 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 TCEAL4Q96EI5 215 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 MCRS1Q96EZ8 462 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 LIMD1Q9UGP4 676 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 ZMYM5Q9UJ78 669 aa16.98■□□□□ 0.31
PPFIA3-213ENST00000602905 TNFRSF10AO00220 468 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 RTN3O95197 1032 aaPredicted RBP16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 ZNF18P17022 549 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 TEAD2Q15562 447 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 ARHGAP44Q17R89 818 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 FILIP1LQ4L180 1135 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 PPP1R26Q5T8A7 1209 aaPredicted RBP16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 NPAS3Q8IXF0 933 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 NUP93Q8N1F7 819 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 UBR7Q8N806 425 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 RBBP8NLQ8NC74 664 aaPredicted RBP16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 MRPS31Q92665 395 aaKnown RBP16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 KAT5Q92993 513 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 TRMT2BQ96GJ1 504 aaKnown RBP16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 LRRC3Q9BY71 257 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 ZNF334Q9HCZ1 680 aaPredicted RBP16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 IGSF9Q9P2J2 1179 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 HESX1Q9UBX0 185 aa16.97■□□□□ 0.31
PPFIA3-213ENST00000602905 HMGA1P17096 107 aaKnown RBP16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 GJA1P17302 382 aa16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 ACO1P21399 889 aaKnown RBP16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 RFX1P22670 979 aa16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 USP8P40818 1118 aa16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 CCR2P41597 374 aa16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 MAP3K7CLP57077 242 aa16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 IFRD2Q12894 506 aaPredicted RBP16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 MTMR3Q13615 1198 aa16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 STILQ15468 1287 aa16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 ARHGAP17Q68EM7 881 aa16.96■□□□□ 0.31
PPFIA3-213ENST00000602905 SMYD5Q6GMV2 418 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 668.8 ms