RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MTA2O94776 668 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 NPR3P17342 541 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 MRPL58Q14197 206 aaKnown RBP23.85■■□□□ 1.41
IRF3-228ENST00000601291 USP41Q3LFD5 358 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 C4orf50Q6ZRC1 276 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 SYCE1Q8N0S2 351 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 TPCN2Q8NHX9 752 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 SMARCD1Q96GM5 515 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 RAD9AQ99638 391 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 PKMYT1Q99640 499 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 ZCWPW1Q9H0M4 648 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 PCDHB12Q9Y5F1 795 aa23.85■■□□□ 1.41
IRF3-228ENST00000601291 CLDN5O00501 218 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 XPO1O14980 1071 aaKnown RBP23.84■■□□□ 1.41
IRF3-228ENST00000601291 PALMO75781 387 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 GABRB2P47870 512 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 GSCP56915 257 aaPredicted RBP23.84■■□□□ 1.41
IRF3-228ENST00000601291 CYP4A22Q5TCH4 519 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 PLEKHA7Q6IQ23 1121 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 DNAJC24Q6P3W2 148 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 PAQR9Q6ZVX9 377 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 B3GALT6Q96L58 329 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 TMEM209Q96SK2 561 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 CYLDQ9NQC7 956 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 COG5Q9UP83 839 aa23.84■■□□□ 1.41
IRF3-228ENST00000601291 CTAGE9A4FU28 777 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 TLL1O43897 1013 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 AP1G2O75843 785 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 EFEMP2O95967 443 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 ERBB2P04626 1255 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 PLA2G4AP47712 749 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 RTP2Q5QGT7 225 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 PMF1Q6P1K2 205 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 SPATA2LQ8IUW3 424 aaPredicted RBP23.83■■□□□ 1.41
IRF3-228ENST00000601291 RNF168Q8IYW5 571 aaPredicted RBP23.83■■□□□ 1.41
IRF3-228ENST00000601291 C3orf20Q8ND61 904 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 HSFY1Q96LI6 401 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 NAPGQ99747 312 aaPredicted RBP23.83■■□□□ 1.41
IRF3-228ENST00000601291 SLC4A5Q9BY07 1137 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 STK39Q9UEW8 545 aa23.83■■□□□ 1.41
IRF3-228ENST00000601291 CHORDC1Q9UHD1 332 aaPredicted RBP23.83■■□□□ 1.41
IRF3-228ENST00000601291 GRID2IPA4D2P6 1211 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 SOD2P04179 222 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 ACADSBP45954 432 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 RGS7P49802 495 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 TAP1Q03518 808 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 MAMLD1Q13495 774 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 ZNF268Q14587 947 aaPredicted RBP23.82■■□□□ 1.4
IRF3-228ENST00000601291 NFE2Q16621 373 aaPredicted RBP23.82■■□□□ 1.4
IRF3-228ENST00000601291 SLC39A12Q504Y0 691 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 KIAA1841Q6NSI8 718 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 CLEC20AQ6ZU45 233 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 PHLDB2Q86SQ0 1253 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 DAAM2Q86T65 1068 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 TNS4Q8IZW8 715 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 JRKLQ9Y4A0 524 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 E5RJQ4 531 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 TULP2O00295 520 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 RASIP1Q5U651 963 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 TAS1R1Q7RTX1 841 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 TMEM110Q86TL2 294 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 LRRTM3Q86VH5 581 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 XYLT1Q86Y38 959 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 SP7Q8TDD2 431 aaPredicted RBP23.82■■□□□ 1.4
IRF3-228ENST00000601291 SELENOOQ9BVL4 669 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 HERC2P3Q9BVR0 1158 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 TMLHEQ9NVH6 421 aa23.82■■□□□ 1.4
IRF3-228ENST00000601291 OR4Q2P0C623 313 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 MAP3K7CLP57077 242 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 C11orf63Q6NUN7 778 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 LLGL2Q6P1M3 1020 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 DDX53Q86TM3 631 aaKnown RBP23.81■■□□□ 1.4
IRF3-228ENST00000601291 ZDHHC17Q8IUH5 632 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 LRRC57Q8N9N7 239 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 RIN2Q8WYP3 895 aaPredicted RBP23.81■■□□□ 1.4
IRF3-228ENST00000601291 PIK3R5Q8WYR1 880 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 VN1R3Q9BXE9 311 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 TJP2Q9UDY2 1190 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 LCMT1Q9UIC8 334 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 ANAPC7Q9UJX3 599 aa23.81■■□□□ 1.4
IRF3-228ENST00000601291 VWA8A3KMH1 1905 aa23.8■■□□□ 1.4
IRF3-228ENST00000601291 BUB1BO60566 1050 aaPredicted RBP23.8■■□□□ 1.4
IRF3-228ENST00000601291 CPB1P15086 417 aa23.8■■□□□ 1.4
IRF3-228ENST00000601291 MAGEA10P43363 369 aaPredicted RBP23.8■■□□□ 1.4
IRF3-228ENST00000601291 RPL34P49207 117 aaKnown RBP23.8■■□□□ 1.4
IRF3-228ENST00000601291 KRT17Q04695 432 aa23.8■■□□□ 1.4
IRF3-228ENST00000601291 SMARCB1Q12824 385 aa23.8■■□□□ 1.4
IRF3-228ENST00000601291 DCUN1D2Q6PH85 259 aa23.8■■□□□ 1.4
IRF3-228ENST00000601291 PIGZQ86VD9 579 aa23.8■■□□□ 1.4
IRF3-228ENST00000601291 FEZF2Q8TBJ5 459 aa23.8■■□□□ 1.4
IRF3-228ENST00000601291 CLP1Q92989 425 aaKnown RBP23.8■■□□□ 1.4
IRF3-228ENST00000601291 FUBP3Q96I24 572 aaKnown RBP eCLIP23.8■■□□□ 1.4
IRF3-228ENST00000601291 CHST7Q9NS84 486 aa23.8■■□□□ 1.4
IRF3-228ENST00000601291 TCRBV5S1A1TA0A578 114 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 GOLGA8SH3BPF8 625 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 BDNFP23560 247 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 GLUD2P49448 558 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 PSMD5Q16401 504 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 OR6B2Q6IFH4 312 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 KCTD13Q8WZ19 329 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms