RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ORC1Q13415 861 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 CT47A1Q5JQC4 288 aaPredicted RBP17.92■□□□□ 0.46
TRIM28-215ENST00000601150 FAM78AQ5JUQ0 283 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 FAM35AQ86V20 835 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 ZSCAN18Q8TBC5 510 aaPredicted RBP17.92■□□□□ 0.46
TRIM28-215ENST00000601150 SMARCD2Q92925 531 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 CNOT6LQ96LI5 555 aaKnown RBP17.92■□□□□ 0.46
TRIM28-215ENST00000601150 C8orf48Q96LL4 319 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 ZSWIM3Q96MP5 696 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 ASB16Q96NS5 453 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 KXD1Q9BQD3 176 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 MED10Q9BTT4 135 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 NT5C1AQ9BXI3 368 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 FAM124BQ9H5Z6 455 aaPredicted RBP17.92■□□□□ 0.46
TRIM28-215ENST00000601150 UXTQ9UBK9 157 aaPredicted RBP17.92■□□□□ 0.46
TRIM28-215ENST00000601150 ANAPC1Q9H1A4 1944 aa17.92■□□□□ 0.46
TRIM28-215ENST00000601150 PATJQ8NI35 1801 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 PRR33A8MZF0 331 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 F8VP50 259 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 NARSO43776 548 aaKnown RBP17.91■□□□□ 0.46
TRIM28-215ENST00000601150 F11P03951 625 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 SRFP11831 508 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 CCDC183Q5T5S1 534 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 GPR158Q5T848 1215 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 CREBRFQ8IUR6 639 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 FUKQ8N0W3 1084 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 ELSPBP1Q96BH3 223 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 ASIC4Q96FT7 647 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 MYRFLQ96LU7 910 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 TWNKQ96RR1 684 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 LRFN3Q9BTN0 628 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 RPP25Q9BUL9 199 aaKnown RBP17.91■□□□□ 0.46
TRIM28-215ENST00000601150 THAP9Q9H5L6 903 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 ZFP14Q9HCL3 533 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 CISHQ9NSE2 258 aa17.91■□□□□ 0.46
TRIM28-215ENST00000601150 CCDC130P13994 396 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 FCARP24071 287 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 TBXAS1P24557 533 aaPredicted RBP17.9■□□□□ 0.46
TRIM28-215ENST00000601150 CACNA2D1P54289 1103 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 CYP4F8P98187 520 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 LRMPQ12912 555 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 CUL2Q13617 745 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 STXBP5Q5T5C0 1151 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 TANGO2Q6ICL3 276 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 SASS6Q6UVJ0 657 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 DENND5BQ6ZUT9 1274 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 PAQR9Q6ZVX9 377 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 TMEM150AQ86TG1 271 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 IRF2BP1Q8IU81 584 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 FAM114A1Q8IWE2 563 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 C12orf29Q8N999 325 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 WHAMMQ8TF30 809 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 SMARCD1Q96GM5 515 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 NT5C1BQ96P26 610 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 ARID3AQ99856 593 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 TASP1Q9H6P5 420 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 TRPV4Q9HBA0 871 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 FAM49BQ9NUQ9 324 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 TMEM30AQ9NV96 361 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 EHD2Q9NZN4 543 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 ZMYM5Q9UJ78 669 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 TRIOO75962 3097 aa17.9■□□□□ 0.46
TRIM28-215ENST00000601150 YWHAEP62258 255 aaKnown RBP17.89■□□□□ 0.45
TRIM28-215ENST00000601150 BMP8AQ7Z5Y6 402 aa17.89■□□□□ 0.45
TRIM28-215ENST00000601150 SLC2A14Q8TDB8 520 aa17.89■□□□□ 0.45
TRIM28-215ENST00000601150 MRPS31Q92665 395 aaKnown RBP17.89■□□□□ 0.45
TRIM28-215ENST00000601150 E2F7Q96AV8 911 aa17.89■□□□□ 0.45
TRIM28-215ENST00000601150 DMAP1Q9NPF5 467 aaPredicted RBP17.89■□□□□ 0.45
TRIM28-215ENST00000601150 SLC2A4RGQ9NR83 387 aa17.89■□□□□ 0.45
TRIM28-215ENST00000601150 KRT82Q9NSB4 513 aa17.89■□□□□ 0.45
TRIM28-215ENST00000601150 FBXL21Q9UKT6 434 aa17.89■□□□□ 0.45
TRIM28-215ENST00000601150 SOBPA7XYQ1 873 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 AP1G2O75843 785 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 CFHP08603 1231 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 DDX6P26196 483 aaKnown RBP eCLIP17.88■□□□□ 0.45
TRIM28-215ENST00000601150 MTIF2P46199 727 aaKnown RBP17.88■□□□□ 0.45
TRIM28-215ENST00000601150 ZNF394Q53GI3 561 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 EHBP1Q8NDI1 1231 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 LMO3Q8TAP4 145 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 PBXIP1Q96AQ6 731 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 CYFIP2Q96F07 1278 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 HNRNPABQ99729 332 aaKnown RBP17.88■□□□□ 0.45
TRIM28-215ENST00000601150 TTLL2Q9BWV7 592 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 PLA2G2FQ9BZM2 168 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 WNT16Q9UBV4 365 aa17.88■□□□□ 0.45
TRIM28-215ENST00000601150 MYO16Q9Y6X6 1858 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 TADA3O75528 432 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 FAM200BP0CF97 657 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 ADORA2BP29275 332 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 WEE1P30291 646 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 VIPR2P41587 438 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 RAD23BP54727 409 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 USP46P62068 366 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 GPC5P78333 572 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 HFE2Q6ZVN8 426 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 MON1AQ86VX9 555 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 ARID3BQ8IVW6 561 aaPredicted RBP17.87■□□□□ 0.45
TRIM28-215ENST00000601150 NUP93Q8N1F7 819 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 DEPDC1BQ8WUY9 529 aa17.87■□□□□ 0.45
TRIM28-215ENST00000601150 TMEM176AQ96HP8 235 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms